Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Lrif1Q8CDD9 Gm37347-201ENSMUST00000193969 3071 ntBASIC7.21□□□□□ -1.25
Lrif1Q8CDD9 Gm43022-201ENSMUST00000197067 4268 ntBASIC7.21□□□□□ -1.25
Lrif1Q8CDD9 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Lrif1Q8CDD9 Gm37043-201ENSMUST00000194609 3105 ntBASIC7.21□□□□□ -1.25
Lrif1Q8CDD9 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC7.21□□□□□ -1.25
Lrif1Q8CDD9 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Lrif1Q8CDD9 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Gm24462-201ENSMUST00000102430 106 ntBASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Gm16221-201ENSMUST00000117331 393 ntBASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Gm13742-201ENSMUST00000118805 457 ntBASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Gm12920-201ENSMUST00000121818 1186 ntBASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Mir7029-201ENSMUST00000184777 61 ntBASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Gm7200-201ENSMUST00000188426 1163 ntBASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Gm28341-201ENSMUST00000190883 472 ntBASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Gm38063-201ENSMUST00000193990 342 ntBASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Gm45888-201ENSMUST00000212348 1229 ntBASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 AC192091.1-201ENSMUST00000218668 439 ntBASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Gm19011-201ENSMUST00000221777 808 ntBASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 AC173482.3-201ENSMUST00000225492 1212 ntBASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 CT009556.3-201ENSMUST00000226173 513 ntBASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Gm38288-201ENSMUST00000195330 1320 ntBASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Lrif1Q8CDD9 Gm3555-201ENSMUST00000160287 1395 ntBASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Gm9256-201ENSMUST00000198106 1420 ntBASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 BC085271-201ENSMUST00000191852 1487 ntBASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Gm15422-201ENSMUST00000117453 541 ntBASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Gm15665-201ENSMUST00000119116 847 ntBASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Gm15843-201ENSMUST00000146593 529 ntBASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Gm22224-201ENSMUST00000157357 93 ntBASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Gm24130-201ENSMUST00000158536 151 ntBASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Gm6799-201ENSMUST00000186919 573 ntBASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Gm37977-201ENSMUST00000193096 721 ntBASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Vmn1r41-204ENSMUST00000227039 985 ntBASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 AC154760.1-201ENSMUST00000227218 673 ntBASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 AC154627.1-201ENSMUST00000228799 1286 ntBASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Lrif1Q8CDD9 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms