Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Gm5050-201ENSMUST00000197164 775 ntBASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
Usp40Q8BWR4 AC154515.3-201ENSMUST00000225081 1159 ntBASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Gm9985-201ENSMUST00000044101 510 ntBASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Dgkh-206ENSMUST00000228362 3308 ntBASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Usp40Q8BWR4 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Gm16057-201ENSMUST00000120811 759 ntBASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Mir1932-201ENSMUST00000157390 90 ntBASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Gm24057-201ENSMUST00000158616 302 ntBASIC10.04□□□□□ -0.8
Usp40Q8BWR4 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Gm37295-201ENSMUST00000192186 109 ntBASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Gm43396-201ENSMUST00000197506 706 ntBASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Gm45497-201ENSMUST00000211701 740 ntBASIC10.04□□□□□ -0.8
Usp40Q8BWR4 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 AC158605.4-201ENSMUST00000219013 3361 ntBASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Gm37995-201ENSMUST00000194958 1714 ntBASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Gm43519-201ENSMUST00000197239 1872 ntBASIC10.04□□□□□ -0.8
Usp40Q8BWR4 AC154347.1-201ENSMUST00000221358 3105 ntBASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Gm45191-201ENSMUST00000205846 5439 ntBASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Usp40Q8BWR4 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Olfr1352-201ENSMUST00000058991 4356 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Gm17841-201ENSMUST00000210711 2425 ntBASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Gm25760-201ENSMUST00000103989 132 ntBASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Gm12375-201ENSMUST00000119331 921 ntBASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Gm6142-201ENSMUST00000120290 325 ntBASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Gm11257-201ENSMUST00000121313 315 ntBASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Gm10913-201ENSMUST00000133732 463 ntBASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Gm29605-201ENSMUST00000190800 292 ntBASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Gm38018-201ENSMUST00000195651 540 ntBASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Gm43546-201ENSMUST00000196721 943 ntBASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Gm43656-201ENSMUST00000197882 434 ntBASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Gm2860-201ENSMUST00000199226 707 ntBASIC10.03□□□□□ -0.8
Usp40Q8BWR4 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Gm43084-201ENSMUST00000200696 947 ntBASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Gm42713-201ENSMUST00000202709 945 ntBASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Gm43533-201ENSMUST00000202933 2936 ntBASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Gm43926-201ENSMUST00000203978 430 ntBASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Gm45136-201ENSMUST00000205793 943 ntBASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC10.03□□□□□ -0.8
Usp40Q8BWR4 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 138.9 ms