Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 AC069562.1-201ENSMUST00000224206 434 ntBASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Cthrc1-204ENSMUST00000226433 596 ntBASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 AC130673.1-201ENSMUST00000227992 435 ntBASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm16391-201ENSMUST00000086601 447 ntBASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm44228-201ENSMUST00000204888 2026 ntBASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Ccdc40Q8BI79 AC154141.1-201ENSMUST00000208403 4136 ntBASIC7.71□□□□□ -1.17
Ccdc40Q8BI79 Gm43769-201ENSMUST00000201871 4323 ntBASIC7.71□□□□□ -1.17
Ccdc40Q8BI79 Gm38147-201ENSMUST00000192397 1798 ntBASIC7.71□□□□□ -1.17
Ccdc40Q8BI79 Gm37685-201ENSMUST00000193507 2177 ntBASIC7.71□□□□□ -1.17
Ccdc40Q8BI79 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
Ccdc40Q8BI79 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
Ccdc40Q8BI79 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ccdc40Q8BI79 Gm43876-201ENSMUST00000203831 3229 ntBASIC7.71□□□□□ -1.17
Ccdc40Q8BI79 Gm10693-201ENSMUST00000144146 2037 ntBASIC7.71□□□□□ -1.17
Ccdc40Q8BI79 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ccdc40Q8BI79 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ccdc40Q8BI79 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ccdc40Q8BI79 Gm37914-201ENSMUST00000195317 2679 ntBASIC7.71□□□□□ -1.17
Ccdc40Q8BI79 Gm44677-201ENSMUST00000209151 3739 ntBASIC7.71□□□□□ -1.17
Ccdc40Q8BI79 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ccdc40Q8BI79 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Ccdc40Q8BI79 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ccdc40Q8BI79 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Gm14016-201ENSMUST00000119095 486 ntBASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Gm11809-201ENSMUST00000120923 950 ntBASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Gm16523-201ENSMUST00000121253 592 ntBASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Gm26197-201ENSMUST00000175033 115 ntBASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Gm24576-201ENSMUST00000175508 248 ntBASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Gm8529-201ENSMUST00000183298 745 ntBASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Mir6239-201ENSMUST00000183564 105 ntBASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Mir8099-2-201ENSMUST00000183568 127 ntBASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Mir8099-1-201ENSMUST00000184238 127 ntBASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Gm18033-201ENSMUST00000186678 550 ntBASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Gm38078-201ENSMUST00000192771 392 ntBASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Gm43542-201ENSMUST00000199505 379 ntBASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Gm18060-201ENSMUST00000207407 564 ntBASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Gm18243-201ENSMUST00000220756 887 ntBASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Mir135b-201ENSMUST00000083501 97 ntBASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Gm37510-201ENSMUST00000194151 4762 ntBASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Gm7842-201ENSMUST00000217691 1379 ntBASIC7.71□□□□□ -1.18
Ccdc40Q8BI79 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Gm6729-201ENSMUST00000165173 1452 ntBASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Gm22660-201ENSMUST00000104193 130 ntBASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms