Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm25379-201ENSMUST00000104338 114 ntBASIC9.35□□□□□ -0.91
Smarcc1P97496 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smarcc1P97496 Gm6640-201ENSMUST00000120629 1587 ntBASIC9.35□□□□□ -0.91
Smarcc1P97496 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC9.35□□□□□ -0.91
Smarcc1P97496 Gm2735-201ENSMUST00000136133 277 ntBASIC9.35□□□□□ -0.91
Smarcc1P97496 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC9.35□□□□□ -0.91
Smarcc1P97496 Gm22223-201ENSMUST00000157360 125 ntBASIC9.35□□□□□ -0.91
Smarcc1P97496 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smarcc1P97496 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smarcc1P97496 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smarcc1P97496 Gm9423-201ENSMUST00000183173 997 ntBASIC9.35□□□□□ -0.91
Smarcc1P97496 Gm29156-201ENSMUST00000187764 499 ntBASIC9.35□□□□□ -0.91
Smarcc1P97496 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC9.35□□□□□ -0.91
Smarcc1P97496 Gm43063-201ENSMUST00000198198 1081 ntBASIC9.35□□□□□ -0.91
Smarcc1P97496 Gm43080-201ENSMUST00000199006 2643 ntBASIC9.35□□□□□ -0.91
Smarcc1P97496 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC9.35□□□□□ -0.91
Smarcc1P97496 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smarcc1P97496 Gm7351-201ENSMUST00000210745 580 ntBASIC9.35□□□□□ -0.91
Smarcc1P97496 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC9.35□□□□□ -0.91
Smarcc1P97496 AC155709.1-201ENSMUST00000218794 162 ntBASIC9.35□□□□□ -0.91
Smarcc1P97496 CT025630.2-201ENSMUST00000228293 487 ntBASIC9.35□□□□□ -0.91
Smarcc1P97496 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Smarcc1P97496 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smarcc1P97496 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Smarcc1P97496 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smarcc1P97496 Gm26831-201ENSMUST00000181458 1380 ntBASIC9.35□□□□□ -0.91
Smarcc1P97496 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smarcc1P97496 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC9.35□□□□□ -0.91
Smarcc1P97496 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Smarcc1P97496 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Smarcc1P97496 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smarcc1P97496 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smarcc1P97496 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smarcc1P97496 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smarcc1P97496 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Smarcc1P97496 Gm42973-201ENSMUST00000197913 3200 ntBASIC9.34□□□□□ -0.91
Smarcc1P97496 Gm2762-207ENSMUST00000202739 2665 ntBASIC9.34□□□□□ -0.91
Smarcc1P97496 Gm42866-201ENSMUST00000195919 3304 ntBASIC9.34□□□□□ -0.91
Smarcc1P97496 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smarcc1P97496 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC9.34□□□□□ -0.91
Smarcc1P97496 Gm24812-201ENSMUST00000175315 284 ntBASIC9.34□□□□□ -0.91
Smarcc1P97496 Gm8305-201ENSMUST00000180022 1195 ntBASIC9.34□□□□□ -0.91
Smarcc1P97496 Mir7046-201ENSMUST00000183435 66 ntBASIC9.34□□□□□ -0.91
Smarcc1P97496 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC9.34□□□□□ -0.91
Smarcc1P97496 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smarcc1P97496 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC9.34□□□□□ -0.91
Smarcc1P97496 Gm6558-202ENSMUST00000192046 180 ntTSL 5 BASIC9.34□□□□□ -0.91
Smarcc1P97496 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smarcc1P97496 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smarcc1P97496 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC9.34□□□□□ -0.91
Smarcc1P97496 Gm42767-201ENSMUST00000198583 632 ntBASIC9.34□□□□□ -0.91
Smarcc1P97496 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC9.34□□□□□ -0.91
Smarcc1P97496 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC9.34□□□□□ -0.91
Smarcc1P97496 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smarcc1P97496 AC155270.1-202ENSMUST00000221503 352 ntBASIC9.34□□□□□ -0.91
Smarcc1P97496 CT009713.1-201ENSMUST00000224828 853 ntBASIC9.34□□□□□ -0.91
Smarcc1P97496 n-R5s169-201ENSMUST00000083110 120 ntBASIC9.34□□□□□ -0.91
Smarcc1P97496 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Smarcc1P97496 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smarcc1P97496 Gm7842-201ENSMUST00000217691 1379 ntBASIC9.34□□□□□ -0.91
Smarcc1P97496 Gm26945-201ENSMUST00000183191 2011 ntBASIC9.34□□□□□ -0.91
Smarcc1P97496 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smarcc1P97496 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smarcc1P97496 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smarcc1P97496 Gm35172-201ENSMUST00000196037 2649 ntBASIC9.34□□□□□ -0.91
Smarcc1P97496 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Smarcc1P97496 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smarcc1P97496 Gm28649-201ENSMUST00000189153 1581 ntBASIC9.33□□□□□ -0.92
Smarcc1P97496 AC159196.3-201ENSMUST00000224307 1841 ntBASIC9.33□□□□□ -0.92
Smarcc1P97496 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smarcc1P97496 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smarcc1P97496 Mycbpap-202ENSMUST00000093945 3168 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Smarcc1P97496 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smarcc1P97496 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smarcc1P97496 AC164433.1-201ENSMUST00000226138 1544 ntBASIC9.33□□□□□ -0.92
Smarcc1P97496 CT571245.1-201ENSMUST00000218642 3465 ntBASIC9.33□□□□□ -0.92
Smarcc1P97496 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smarcc1P97496 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smarcc1P97496 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smarcc1P97496 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Smarcc1P97496 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Smarcc1P97496 Gm26416-201ENSMUST00000104280 134 ntBASIC9.33□□□□□ -0.92
Smarcc1P97496 Gm4919-201ENSMUST00000117825 604 ntBASIC9.33□□□□□ -0.92
Smarcc1P97496 Gm12944-201ENSMUST00000119262 463 ntBASIC9.33□□□□□ -0.92
Smarcc1P97496 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC9.33□□□□□ -0.92
Smarcc1P97496 Gm23187-201ENSMUST00000175746 86 ntBASIC9.33□□□□□ -0.92
Smarcc1P97496 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC9.33□□□□□ -0.92
Smarcc1P97496 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC9.33□□□□□ -0.92
Smarcc1P97496 Gm27014-201ENSMUST00000182658 937 ntBASIC9.33□□□□□ -0.92
Smarcc1P97496 Gm8101-201ENSMUST00000192796 478 ntBASIC9.33□□□□□ -0.92
Smarcc1P97496 Ighv10-4-201ENSMUST00000193702 299 ntBASIC9.33□□□□□ -0.92
Smarcc1P97496 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC9.33□□□□□ -0.92
Smarcc1P97496 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smarcc1P97496 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC9.33□□□□□ -0.92
Smarcc1P97496 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC9.33□□□□□ -0.92
Smarcc1P97496 AC079644.2-201ENSMUST00000220581 322 ntBASIC9.33□□□□□ -0.92
Smarcc1P97496 AC124397.1-201ENSMUST00000224296 653 ntBASIC9.33□□□□□ -0.92
Smarcc1P97496 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Smarcc1P97496 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smarcc1P97496 Havcr1-201ENSMUST00000047568 1892 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms