Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CiitaP79621 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CiitaP79621 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
CiitaP79621 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC8□□□□□ -1.13
CiitaP79621 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
CiitaP79621 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
CiitaP79621 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CiitaP79621 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CiitaP79621 Gm43168-201ENSMUST00000201039 1612 ntBASIC8□□□□□ -1.13
CiitaP79621 Gm43254-201ENSMUST00000199187 2491 ntBASIC8□□□□□ -1.13
CiitaP79621 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
CiitaP79621 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CiitaP79621 Klf10-202ENSMUST00000226363 2917 ntBASIC7.99□□□□□ -1.13
CiitaP79621 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC7.99□□□□□ -1.13
CiitaP79621 Gm38262-201ENSMUST00000194760 1382 ntBASIC7.99□□□□□ -1.13
CiitaP79621 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC7.99□□□□□ -1.13
CiitaP79621 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CiitaP79621 Gm45807-201ENSMUST00000209142 2874 ntBASIC7.99□□□□□ -1.13
CiitaP79621 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC7.99□□□□□ -1.13
CiitaP79621 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
CiitaP79621 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC7.99□□□□□ -1.13
CiitaP79621 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC7.99□□□□□ -1.13
CiitaP79621 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CiitaP79621 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CiitaP79621 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CiitaP79621 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CiitaP79621 Gm2976-201ENSMUST00000160362 513 ntBASIC7.99□□□□□ -1.13
CiitaP79621 Gm18191-201ENSMUST00000174624 824 ntBASIC7.99□□□□□ -1.13
CiitaP79621 Gm26179-201ENSMUST00000177723 132 ntBASIC7.99□□□□□ -1.13
CiitaP79621 Gm5147-201ENSMUST00000185999 794 ntBASIC7.99□□□□□ -1.13
CiitaP79621 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CiitaP79621 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC7.99□□□□□ -1.13
CiitaP79621 Gm29214-201ENSMUST00000190216 570 ntBASIC7.99□□□□□ -1.13
CiitaP79621 Gm29369-201ENSMUST00000190674 615 ntBASIC7.99□□□□□ -1.13
CiitaP79621 Gm43147-201ENSMUST00000196944 542 ntBASIC7.99□□□□□ -1.13
CiitaP79621 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC7.99□□□□□ -1.13
CiitaP79621 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CiitaP79621 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC7.99□□□□□ -1.13
CiitaP79621 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC7.99□□□□□ -1.13
CiitaP79621 Gm6581-201ENSMUST00000214545 260 ntBASIC7.99□□□□□ -1.13
CiitaP79621 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CiitaP79621 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC7.99□□□□□ -1.13
CiitaP79621 AV026068-229ENSMUST00000225516 595 ntBASIC7.99□□□□□ -1.13
CiitaP79621 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC7.99□□□□□ -1.13
CiitaP79621 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC7.99□□□□□ -1.13
CiitaP79621 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC7.99□□□□□ -1.13
CiitaP79621 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CiitaP79621 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
CiitaP79621 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
CiitaP79621 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CiitaP79621 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CiitaP79621 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
CiitaP79621 CT025642.2-201ENSMUST00000225009 1649 ntBASIC7.99□□□□□ -1.13
CiitaP79621 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CiitaP79621 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CiitaP79621 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CiitaP79621 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CiitaP79621 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
CiitaP79621 Gm13821-201ENSMUST00000202029 3201 ntBASIC7.99□□□□□ -1.13
CiitaP79621 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CiitaP79621 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
CiitaP79621 Gm18701-201ENSMUST00000188281 1536 ntBASIC7.98□□□□□ -1.13
CiitaP79621 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CiitaP79621 Gm18830-201ENSMUST00000199036 1396 ntBASIC7.98□□□□□ -1.13
CiitaP79621 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC7.98□□□□□ -1.13
CiitaP79621 AC164883.2-201ENSMUST00000227931 3815 ntBASIC7.98□□□□□ -1.13
CiitaP79621 Gm19801-201ENSMUST00000218231 1882 ntBASIC7.98□□□□□ -1.13
CiitaP79621 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC7.98□□□□□ -1.13
CiitaP79621 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
CiitaP79621 CT010453.1-201ENSMUST00000226795 2201 ntBASIC7.98□□□□□ -1.13
CiitaP79621 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
CiitaP79621 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC7.98□□□□□ -1.13
CiitaP79621 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC7.98□□□□□ -1.13
CiitaP79621 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CiitaP79621 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC7.98□□□□□ -1.13
CiitaP79621 AC154522.1-201ENSMUST00000224647 1903 ntBASIC7.98□□□□□ -1.13
CiitaP79621 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
CiitaP79621 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
CiitaP79621 Gm11343-201ENSMUST00000120579 599 ntBASIC7.98□□□□□ -1.13
CiitaP79621 Gm12321-201ENSMUST00000121485 804 ntBASIC7.98□□□□□ -1.13
CiitaP79621 Gm26480-201ENSMUST00000122619 297 ntBASIC7.98□□□□□ -1.13
CiitaP79621 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CiitaP79621 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CiitaP79621 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC7.98□□□□□ -1.13
CiitaP79621 Gm24442-201ENSMUST00000157238 327 ntBASIC7.98□□□□□ -1.13
CiitaP79621 Mir7058-201ENSMUST00000184637 75 ntBASIC7.98□□□□□ -1.13
CiitaP79621 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC7.98□□□□□ -1.13
CiitaP79621 Gm28580-201ENSMUST00000186767 88 ntBASIC7.98□□□□□ -1.13
CiitaP79621 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CiitaP79621 Gm37260-201ENSMUST00000193748 1251 ntBASIC7.98□□□□□ -1.13
CiitaP79621 Gm38337-201ENSMUST00000193986 599 ntBASIC7.98□□□□□ -1.13
CiitaP79621 Gm35108-201ENSMUST00000194321 699 ntBASIC7.98□□□□□ -1.13
CiitaP79621 Gm33191-201ENSMUST00000195604 699 ntBASIC7.98□□□□□ -1.13
CiitaP79621 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC7.98□□□□□ -1.13
CiitaP79621 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC7.98□□□□□ -1.13
CiitaP79621 Gm45432-201ENSMUST00000210391 416 ntBASIC7.98□□□□□ -1.13
CiitaP79621 Gm19217-201ENSMUST00000218238 328 ntBASIC7.98□□□□□ -1.13
CiitaP79621 AC155834.1-201ENSMUST00000220033 498 ntBASIC7.98□□□□□ -1.13
CiitaP79621 Gm18960-201ENSMUST00000222962 713 ntBASIC7.98□□□□□ -1.13
CiitaP79621 AC154849.2-201ENSMUST00000223781 974 ntBASIC7.98□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms