Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm18501-201ENSMUST00000185363 664 ntBASIC7.85□□□□□ -1.15
Shmt1P50431 Gm5147-201ENSMUST00000185999 794 ntBASIC7.85□□□□□ -1.15
Shmt1P50431 Gm28877-201ENSMUST00000191349 604 ntBASIC7.85□□□□□ -1.15
Shmt1P50431 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC7.85□□□□□ -1.15
Shmt1P50431 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC7.85□□□□□ -1.15
Shmt1P50431 Gm38079-201ENSMUST00000195603 154 ntBASIC7.85□□□□□ -1.15
Shmt1P50431 Ighv8-15-201ENSMUST00000197770 294 ntBASIC7.85□□□□□ -1.15
Shmt1P50431 Gm42723-201ENSMUST00000199966 1044 ntBASIC7.85□□□□□ -1.15
Shmt1P50431 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Shmt1P50431 Gm45478-201ENSMUST00000209472 211 ntBASIC7.85□□□□□ -1.15
Shmt1P50431 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC7.85□□□□□ -1.15
Shmt1P50431 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC7.85□□□□□ -1.15
Shmt1P50431 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Shmt1P50431 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC7.85□□□□□ -1.15
Shmt1P50431 Gm46311-201ENSMUST00000217971 203 ntBASIC7.85□□□□□ -1.15
Shmt1P50431 AC133598.4-201ENSMUST00000224577 454 ntBASIC7.85□□□□□ -1.15
Shmt1P50431 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Shmt1P50431 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Shmt1P50431 4930542C16Rik-201ENSMUST00000062438 1090 ntTSL 2 BASIC7.85□□□□□ -1.15
Shmt1P50431 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Shmt1P50431 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Shmt1P50431 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Shmt1P50431 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Shmt1P50431 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC7.85□□□□□ -1.15
Shmt1P50431 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
Shmt1P50431 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Shmt1P50431 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Shmt1P50431 Gm45407-201ENSMUST00000209499 3676 ntBASIC7.85□□□□□ -1.15
Shmt1P50431 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Shmt1P50431 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC7.85□□□□□ -1.15
Shmt1P50431 AC123705.1-201ENSMUST00000222512 2058 ntBASIC7.85□□□□□ -1.15
Shmt1P50431 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC7.84□□□□□ -1.15
Shmt1P50431 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Shmt1P50431 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Shmt1P50431 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Shmt1P50431 Tcf24-201ENSMUST00000097824 2639 ntBASIC7.84□□□□□ -1.15
Shmt1P50431 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC7.84□□□□□ -1.15
Shmt1P50431 AC164978.1-201ENSMUST00000228608 4011 ntBASIC7.84□□□□□ -1.15
Shmt1P50431 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Shmt1P50431 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
Shmt1P50431 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC7.84□□□□□ -1.15
Shmt1P50431 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Shmt1P50431 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Shmt1P50431 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Shmt1P50431 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Shmt1P50431 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Shmt1P50431 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Shmt1P50431 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Shmt1P50431 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Shmt1P50431 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC7.84□□□□□ -1.15
Shmt1P50431 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Shmt1P50431 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Shmt1P50431 Gm25396-201ENSMUST00000103981 133 ntBASIC7.84□□□□□ -1.15
Shmt1P50431 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
Shmt1P50431 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC7.84□□□□□ -1.15
Shmt1P50431 Gm14938-201ENSMUST00000119482 943 ntBASIC7.84□□□□□ -1.15
Shmt1P50431 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
Shmt1P50431 Trav8-2-201ENSMUST00000130122 337 ntBASIC7.84□□□□□ -1.15
Shmt1P50431 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Shmt1P50431 Gm6428-201ENSMUST00000161062 345 ntBASIC7.84□□□□□ -1.15
Shmt1P50431 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Shmt1P50431 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Shmt1P50431 Mir3078-201ENSMUST00000175231 87 ntBASIC7.84□□□□□ -1.15
Shmt1P50431 Gm27218-201ENSMUST00000183745 392 ntBASIC7.84□□□□□ -1.15
Shmt1P50431 Gm42584-201ENSMUST00000201404 220 ntBASIC7.84□□□□□ -1.15
Shmt1P50431 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Shmt1P50431 Gm18690-201ENSMUST00000204488 985 ntBASIC7.84□□□□□ -1.15
Shmt1P50431 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Shmt1P50431 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC7.84□□□□□ -1.15
Shmt1P50431 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Shmt1P50431 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC7.84□□□□□ -1.15
Shmt1P50431 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC7.84□□□□□ -1.15
Shmt1P50431 AC131029.2-203ENSMUST00000228116 1244 ntBASIC7.84□□□□□ -1.15
Shmt1P50431 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC7.84□□□□□ -1.15
Shmt1P50431 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Shmt1P50431 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Shmt1P50431 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Shmt1P50431 Gm2065-201ENSMUST00000194697 2757 ntBASIC7.84□□□□□ -1.15
Shmt1P50431 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Shmt1P50431 Gm5841-201ENSMUST00000195307 2177 ntBASIC7.84□□□□□ -1.15
Shmt1P50431 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Shmt1P50431 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Shmt1P50431 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Shmt1P50431 Gm42549-201ENSMUST00000202392 7004 ntBASIC7.84□□□□□ -1.15
Shmt1P50431 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Shmt1P50431 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
Shmt1P50431 Gm2654-201ENSMUST00000221381 1592 ntBASIC7.84□□□□□ -1.15
Shmt1P50431 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Shmt1P50431 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Shmt1P50431 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC7.83□□□□□ -1.16
Shmt1P50431 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shmt1P50431 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shmt1P50431 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shmt1P50431 Gm37891-201ENSMUST00000195585 1326 ntBASIC7.83□□□□□ -1.16
Shmt1P50431 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shmt1P50431 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shmt1P50431 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shmt1P50431 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Shmt1P50431 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shmt1P50431 AC121286.2-201ENSMUST00000218069 2470 ntBASIC7.83□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 113 ms