Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Tnfsf4P43488 Gm22562-201ENSMUST00000157334 111 ntBASIC6.98□□□□□ -1.29
Tnfsf4P43488 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
Tnfsf4P43488 Gm8304-201ENSMUST00000185744 584 ntBASIC6.98□□□□□ -1.29
Tnfsf4P43488 Gm20587-201ENSMUST00000186367 1186 ntBASIC6.98□□□□□ -1.29
Tnfsf4P43488 Gm18033-201ENSMUST00000186678 550 ntBASIC6.98□□□□□ -1.29
Tnfsf4P43488 Gm18351-201ENSMUST00000188646 883 ntBASIC6.98□□□□□ -1.29
Tnfsf4P43488 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC6.98□□□□□ -1.29
Tnfsf4P43488 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC6.98□□□□□ -1.29
Tnfsf4P43488 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC6.98□□□□□ -1.29
Tnfsf4P43488 I830127L07Rik-202ENSMUST00000190944 405 ntBASIC6.98□□□□□ -1.29
Tnfsf4P43488 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC6.98□□□□□ -1.29
Tnfsf4P43488 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC6.98□□□□□ -1.29
Tnfsf4P43488 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC6.98□□□□□ -1.29
Tnfsf4P43488 Gm44566-201ENSMUST00000207638 304 ntBASIC6.98□□□□□ -1.29
Tnfsf4P43488 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Tnfsf4P43488 Gm4780-201ENSMUST00000213206 1242 ntBASIC6.98□□□□□ -1.29
Tnfsf4P43488 AC159205.2-201ENSMUST00000223759 816 ntBASIC6.98□□□□□ -1.29
Tnfsf4P43488 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Tnfsf4P43488 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Tnfsf4P43488 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Tnfsf4P43488 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Tnfsf4P43488 Gm5250-201ENSMUST00000059065 321 ntBASIC6.98□□□□□ -1.29
Tnfsf4P43488 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Tnfsf4P43488 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Tnfsf4P43488 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Tnfsf4P43488 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Tnfsf4P43488 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Tnfsf4P43488 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.98□□□□□ -1.29
Tnfsf4P43488 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Tnfsf4P43488 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Tnfsf4P43488 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC6.98□□□□□ -1.29
Tnfsf4P43488 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Tnfsf4P43488 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Tnfsf4P43488 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Tnfsf4P43488 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Tnfsf4P43488 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Tnfsf4P43488 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Tnfsf4P43488 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Tnfsf4P43488 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Gm26014-201ENSMUST00000104405 132 ntBASIC6.97□□□□□ -1.29
Tnfsf4P43488 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Gm22670-201ENSMUST00000158724 143 ntBASIC6.97□□□□□ -1.29
Tnfsf4P43488 Gm2951-201ENSMUST00000169447 490 ntBASIC6.97□□□□□ -1.29
Tnfsf4P43488 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Tnfsf4P43488 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Gm29355-201ENSMUST00000188178 697 ntBASIC6.97□□□□□ -1.29
Tnfsf4P43488 Gm28953-201ENSMUST00000188336 697 ntBASIC6.97□□□□□ -1.29
Tnfsf4P43488 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Gm28952-201ENSMUST00000189285 681 ntBASIC6.97□□□□□ -1.29
Tnfsf4P43488 Gm20788-201ENSMUST00000190538 697 ntBASIC6.97□□□□□ -1.29
Tnfsf4P43488 Gm37395-201ENSMUST00000194721 697 ntBASIC6.97□□□□□ -1.29
Tnfsf4P43488 Gm36933-201ENSMUST00000194945 3071 ntBASIC6.97□□□□□ -1.29
Tnfsf4P43488 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Gm42997-201ENSMUST00000196074 918 ntTSL 3 BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Gm7631-201ENSMUST00000196935 1100 ntBASIC6.97□□□□□ -1.29
Tnfsf4P43488 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC6.97□□□□□ -1.29
Tnfsf4P43488 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC6.97□□□□□ -1.29
Tnfsf4P43488 AC153864.1-201ENSMUST00000218482 523 ntBASIC6.97□□□□□ -1.29
Tnfsf4P43488 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC6.97□□□□□ -1.29
Tnfsf4P43488 AC126939.4-201ENSMUST00000225360 743 ntBASIC6.97□□□□□ -1.29
Tnfsf4P43488 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.97□□□□□ -1.29
Tnfsf4P43488 AC161537.1-202ENSMUST00000228450 868 ntBASIC6.97□□□□□ -1.29
Tnfsf4P43488 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Gm6807-201ENSMUST00000077435 888 ntBASIC6.97□□□□□ -1.29
Tnfsf4P43488 Gm24924-201ENSMUST00000084007 164 ntBASIC6.97□□□□□ -1.29
Tnfsf4P43488 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Tnfsf4P43488 C130093G08Rik-201ENSMUST00000202489 2226 ntBASIC6.97□□□□□ -1.29
Tnfsf4P43488 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Tnfsf4P43488 AC154522.1-201ENSMUST00000224647 1903 ntBASIC6.97□□□□□ -1.29
Tnfsf4P43488 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Gm45876-201ENSMUST00000212698 2709 ntBASIC6.97□□□□□ -1.29
Tnfsf4P43488 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Tnfsf4P43488 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.97□□□□□ -1.29
Tnfsf4P43488 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Tnfsf4P43488 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
Tnfsf4P43488 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Tnfsf4P43488 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Tnfsf4P43488 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Tnfsf4P43488 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Tnfsf4P43488 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
Tnfsf4P43488 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC6.96□□□□□ -1.29
Tnfsf4P43488 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Tnfsf4P43488 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 121.3 ms