Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
HttP42859 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
HttP42859 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
HttP42859 Gm14251-201ENSMUST00000122133 279 ntBASIC7.45□□□□□ -1.22
HttP42859 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HttP42859 Gm4613-201ENSMUST00000165488 276 ntBASIC7.45□□□□□ -1.22
HttP42859 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
HttP42859 Gm42767-201ENSMUST00000198583 632 ntBASIC7.45□□□□□ -1.22
HttP42859 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HttP42859 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC7.45□□□□□ -1.22
HttP42859 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7.45□□□□□ -1.22
HttP42859 AC165260.6-206ENSMUST00000223884 3698 ntBASIC7.45□□□□□ -1.22
HttP42859 Gm38262-201ENSMUST00000194760 1382 ntBASIC7.45□□□□□ -1.22
HttP42859 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
HttP42859 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HttP42859 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HttP42859 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC7.45□□□□□ -1.22
HttP42859 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
HttP42859 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC7.45□□□□□ -1.22
HttP42859 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HttP42859 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
HttP42859 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
HttP42859 Gm12242-201ENSMUST00000118824 738 ntBASIC7.45□□□□□ -1.22
HttP42859 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC7.45□□□□□ -1.22
HttP42859 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HttP42859 Gm38022-201ENSMUST00000191762 403 ntBASIC7.45□□□□□ -1.22
HttP42859 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC7.45□□□□□ -1.22
HttP42859 AC154595.2-201ENSMUST00000225067 310 ntBASIC7.45□□□□□ -1.22
HttP42859 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HttP42859 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
HttP42859 Cndp1-201ENSMUST00000070139 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HttP42859 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
HttP42859 Gm2654-201ENSMUST00000221381 1592 ntBASIC7.44□□□□□ -1.22
HttP42859 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HttP42859 Gm4806-201ENSMUST00000222704 1690 ntBASIC7.44□□□□□ -1.22
HttP42859 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HttP42859 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HttP42859 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
HttP42859 Sycp1-201ENSMUST00000029448 3437 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HttP42859 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
HttP42859 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
HttP42859 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HttP42859 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HttP42859 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HttP42859 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC7.44□□□□□ -1.22
HttP42859 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HttP42859 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC7.44□□□□□ -1.22
HttP42859 AC121997.2-202ENSMUST00000227158 939 ntBASIC7.44□□□□□ -1.22
HttP42859 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
HttP42859 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC7.44□□□□□ -1.22
HttP42859 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HttP42859 Ces1g-201ENSMUST00000044602 2388 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HttP42859 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
HttP42859 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC7.44□□□□□ -1.22
HttP42859 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HttP42859 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
HttP42859 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC7.44□□□□□ -1.22
HttP42859 Gm37604-201ENSMUST00000191749 1272 ntBASIC7.44□□□□□ -1.22
HttP42859 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC7.44□□□□□ -1.22
HttP42859 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC7.44□□□□□ -1.22
HttP42859 AC132260.1-201ENSMUST00000225499 734 ntBASIC7.44□□□□□ -1.22
HttP42859 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
HttP42859 Gm16415-201ENSMUST00000080097 489 ntBASIC7.44□□□□□ -1.22
HttP42859 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
HttP42859 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
HttP42859 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HttP42859 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
HttP42859 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HttP42859 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HttP42859 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
HttP42859 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
HttP42859 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC7.43□□□□□ -1.22
HttP42859 Gm12135-201ENSMUST00000119170 466 ntBASIC7.43□□□□□ -1.22
HttP42859 Gm13462-201ENSMUST00000121472 961 ntBASIC7.43□□□□□ -1.22
HttP42859 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC7.43□□□□□ -1.22
HttP42859 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC7.43□□□□□ -1.22
HttP42859 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC7.43□□□□□ -1.22
HttP42859 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC7.43□□□□□ -1.22
HttP42859 Gm44565-201ENSMUST00000208194 269 ntBASIC7.43□□□□□ -1.22
HttP42859 CT485607.3-201ENSMUST00000213361 672 ntBASIC7.43□□□□□ -1.22
HttP42859 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HttP42859 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC7.43□□□□□ -1.22
HttP42859 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
HttP42859 Cd300a-202ENSMUST00000106582 4645 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
HttP42859 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
HttP42859 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HttP42859 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
HttP42859 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HttP42859 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HttP42859 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
HttP42859 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HttP42859 Elmo1-201ENSMUST00000072519 5464 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HttP42859 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HttP42859 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HttP42859 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HttP42859 Gm14512-201ENSMUST00000117924 230 ntBASIC7.43□□□□□ -1.22
HttP42859 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC7.43□□□□□ -1.22
HttP42859 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC7.43□□□□□ -1.22
HttP42859 Gm16164-201ENSMUST00000160078 468 ntBASIC7.43□□□□□ -1.22
HttP42859 Gm23806-201ENSMUST00000175157 109 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms