Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Gm44116-201ENSMUST00000204269 1525 ntBASIC7.97□□□□□ -1.13
Chmp6P0C0A3 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 AC159195.2-201ENSMUST00000223670 3757 ntBASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Gm42568-201ENSMUST00000195639 1841 ntBASIC7.96□□□□□ -1.13
Chmp6P0C0A3 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC7.96□□□□□ -1.13
Chmp6P0C0A3 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC7.96□□□□□ -1.13
Chmp6P0C0A3 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
Chmp6P0C0A3 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC7.96□□□□□ -1.13
Chmp6P0C0A3 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Chmp6P0C0A3 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Chmp6P0C0A3 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
Chmp6P0C0A3 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Gm13038-201ENSMUST00000119886 459 ntBASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Gm24139-201ENSMUST00000122780 288 ntBASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Gm22206-201ENSMUST00000158612 116 ntBASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Mir6972-201ENSMUST00000184774 64 ntBASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Gm3121-201ENSMUST00000187086 406 ntBASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Gm37225-201ENSMUST00000193423 325 ntBASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Gm4780-201ENSMUST00000213206 1242 ntBASIC7.96□□□□□ -1.14
Chmp6P0C0A3 AC118006.3-201ENSMUST00000223948 1176 ntBASIC7.96□□□□□ -1.14
Chmp6P0C0A3 AC163038.4-201ENSMUST00000224942 474 ntBASIC7.96□□□□□ -1.14
Chmp6P0C0A3 AC154838.3-201ENSMUST00000228876 965 ntBASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Dennd6a-203ENSMUST00000224111 2692 ntBASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Gm43533-201ENSMUST00000202933 2936 ntBASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 AC140280.1-201ENSMUST00000227826 1847 ntBASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Gm18632-201ENSMUST00000222597 2087 ntBASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Gm16072-201ENSMUST00000119574 2377 ntBASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Gm7842-201ENSMUST00000217691 1379 ntBASIC7.96□□□□□ -1.14
Chmp6P0C0A3 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC7.96□□□□□ -1.14
Chmp6P0C0A3 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Gm37984-201ENSMUST00000191641 3733 ntBASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Gm28651-202ENSMUST00000227968 2693 ntBASIC7.95□□□□□ -1.14
Chmp6P0C0A3 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Gm12306-201ENSMUST00000117256 171 ntBASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Gm7129-201ENSMUST00000117402 997 ntBASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Gm15362-201ENSMUST00000121459 388 ntBASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Gm24782-201ENSMUST00000157641 132 ntBASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Gm27458-201ENSMUST00000185108 121 ntBASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Gm38063-201ENSMUST00000193990 342 ntBASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Gm42938-201ENSMUST00000198414 1072 ntBASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 AC152940.1-201ENSMUST00000226504 139 ntBASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC7.95□□□□□ -1.14
Chmp6P0C0A3 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 105.7 ms