Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC7.42□□□□□ -1.22
CopeO89079 Gm22687-201ENSMUST00000158301 105 ntBASIC7.42□□□□□ -1.22
CopeO89079 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CopeO89079 Gm8529-201ENSMUST00000183298 745 ntBASIC7.42□□□□□ -1.22
CopeO89079 Mir6974-201ENSMUST00000184381 83 ntBASIC7.42□□□□□ -1.22
CopeO89079 Gm21181-201ENSMUST00000186249 330 ntBASIC7.42□□□□□ -1.22
CopeO89079 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CopeO89079 Gm38337-201ENSMUST00000193986 599 ntBASIC7.42□□□□□ -1.22
CopeO89079 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC7.42□□□□□ -1.22
CopeO89079 Gm5723-201ENSMUST00000203096 432 ntBASIC7.42□□□□□ -1.22
CopeO89079 Gm7565-201ENSMUST00000203611 623 ntBASIC7.42□□□□□ -1.22
CopeO89079 Gm5307-201ENSMUST00000204772 760 ntBASIC7.42□□□□□ -1.22
CopeO89079 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CopeO89079 Gm29977-201ENSMUST00000206804 724 ntBASIC7.42□□□□□ -1.22
CopeO89079 Gm45506-201ENSMUST00000211620 280 ntBASIC7.42□□□□□ -1.22
CopeO89079 Gm45497-201ENSMUST00000211701 740 ntBASIC7.42□□□□□ -1.22
CopeO89079 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC7.42□□□□□ -1.22
CopeO89079 Gm2915-201ENSMUST00000222565 787 ntBASIC7.42□□□□□ -1.22
CopeO89079 Hsd17b3-204ENSMUST00000222783 1184 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CopeO89079 AC159205.2-201ENSMUST00000223759 816 ntBASIC7.42□□□□□ -1.22
CopeO89079 AC238940.2-201ENSMUST00000224202 330 ntBASIC7.42□□□□□ -1.22
CopeO89079 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CopeO89079 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CopeO89079 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CopeO89079 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CopeO89079 Olfr1255-201ENSMUST00000057369 933 ntBASIC7.42□□□□□ -1.22
CopeO89079 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CopeO89079 Gm24924-201ENSMUST00000084007 164 ntBASIC7.42□□□□□ -1.22
CopeO89079 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CopeO89079 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CopeO89079 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC7.42□□□□□ -1.22
CopeO89079 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CopeO89079 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CopeO89079 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CopeO89079 Gm42462-201ENSMUST00000196543 1363 ntBASIC7.42□□□□□ -1.22
CopeO89079 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
CopeO89079 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CopeO89079 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CopeO89079 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CopeO89079 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CopeO89079 Gm6729-201ENSMUST00000165173 1452 ntBASIC7.42□□□□□ -1.22
CopeO89079 AC135083.2-201ENSMUST00000228599 1456 ntBASIC7.42□□□□□ -1.22
CopeO89079 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
CopeO89079 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CopeO89079 Gm17300-201ENSMUST00000172202 1527 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CopeO89079 Gm18537-202ENSMUST00000206215 1503 ntBASIC7.42□□□□□ -1.22
CopeO89079 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CopeO89079 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CopeO89079 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CopeO89079 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CopeO89079 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CopeO89079 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CopeO89079 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CopeO89079 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CopeO89079 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CopeO89079 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CopeO89079 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CopeO89079 Ghrh-202ENSMUST00000109536 503 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CopeO89079 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
CopeO89079 Gm13160-201ENSMUST00000118441 627 ntBASIC7.41□□□□□ -1.22
CopeO89079 Gm15096-201ENSMUST00000121918 878 ntBASIC7.41□□□□□ -1.22
CopeO89079 Gm18191-201ENSMUST00000174624 824 ntBASIC7.41□□□□□ -1.22
CopeO89079 Six3os1-213ENSMUST00000177487 537 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CopeO89079 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CopeO89079 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CopeO89079 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC7.41□□□□□ -1.22
CopeO89079 Scgb1b25-ps-201ENSMUST00000186419 415 ntBASIC7.41□□□□□ -1.22
CopeO89079 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CopeO89079 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CopeO89079 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC7.41□□□□□ -1.22
CopeO89079 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CopeO89079 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC7.41□□□□□ -1.22
CopeO89079 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CopeO89079 Gm18207-201ENSMUST00000205486 526 ntBASIC7.41□□□□□ -1.22
CopeO89079 Gm18192-201ENSMUST00000210174 941 ntBASIC7.41□□□□□ -1.22
CopeO89079 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC7.41□□□□□ -1.22
CopeO89079 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC7.41□□□□□ -1.22
CopeO89079 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CopeO89079 Gm4780-201ENSMUST00000213206 1242 ntBASIC7.41□□□□□ -1.22
CopeO89079 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC7.41□□□□□ -1.22
CopeO89079 Vmn1r41-202ENSMUST00000226337 888 ntBASIC7.41□□□□□ -1.22
CopeO89079 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC7.41□□□□□ -1.22
CopeO89079 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CopeO89079 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CopeO89079 4930443O20Rik-201ENSMUST00000135659 1443 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CopeO89079 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CopeO89079 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
CopeO89079 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CopeO89079 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC7.41□□□□□ -1.22
CopeO89079 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CopeO89079 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CopeO89079 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CopeO89079 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
CopeO89079 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CopeO89079 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CopeO89079 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CopeO89079 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CopeO89079 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CopeO89079 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC7.4□□□□□ -1.22
CopeO89079 Gm10855-201ENSMUST00000100426 2541 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms