Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm9723-201ENSMUST00000192100 457 ntBASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Gm6197-201ENSMUST00000192273 454 ntBASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Gm37729-201ENSMUST00000194761 1172 ntBASIC6.96□□□□□ -1.3
Trim3Q9R1R2 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Gm40853-201ENSMUST00000221342 582 ntBASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Gm19011-201ENSMUST00000221777 808 ntBASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Gm9255-201ENSMUST00000223225 581 ntBASIC6.96□□□□□ -1.3
Trim3Q9R1R2 AC154785.1-201ENSMUST00000223280 572 ntBASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Mir484-201ENSMUST00000093566 67 ntBASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Gm42630-201ENSMUST00000195908 3448 ntBASIC6.96□□□□□ -1.3
Trim3Q9R1R2 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Gm44228-201ENSMUST00000204888 2026 ntBASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Gm37790-201ENSMUST00000193136 3346 ntBASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 AC093022.3-201ENSMUST00000226569 1926 ntBASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Gm20768-201ENSMUST00000199527 2338 ntBASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 AC159002.2-201ENSMUST00000228843 4874 ntBASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Mir669e-201ENSMUST00000117003 119 ntBASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Gm9286-201ENSMUST00000173586 508 ntBASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Gm22408-201ENSMUST00000174925 65 ntBASIC6.95□□□□□ -1.3
Trim3Q9R1R2 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Gm29562-201ENSMUST00000190113 904 ntBASIC6.95□□□□□ -1.3
Trim3Q9R1R2 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Gm43590-201ENSMUST00000195987 387 ntBASIC6.95□□□□□ -1.3
Trim3Q9R1R2 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Gm43542-201ENSMUST00000199505 379 ntBASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 AL590616.1-201ENSMUST00000223339 574 ntBASIC6.95□□□□□ -1.3
Trim3Q9R1R2 CT010480.3-201ENSMUST00000224712 259 ntBASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Zfp874a-208ENSMUST00000225479 1092 ntBASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC6.95□□□□□ -1.3
Trim3Q9R1R2 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Gm37161-201ENSMUST00000191994 2697 ntBASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Gm43515-201ENSMUST00000197930 2141 ntBASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC6.95□□□□□ -1.3
Trim3Q9R1R2 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm45112-201ENSMUST00000208576 5125 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms