Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Chmp4bQ9D8B3 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Chmp4bQ9D8B3 AC154597.1-201ENSMUST00000224095 2713 ntBASIC9.29□□□□□ -0.92
Chmp4bQ9D8B3 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Chmp4bQ9D8B3 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Chmp4bQ9D8B3 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Chmp4bQ9D8B3 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Chmp4bQ9D8B3 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC9.29□□□□□ -0.92
Chmp4bQ9D8B3 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Chmp4bQ9D8B3 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Gm45537-201ENSMUST00000211539 2708 ntBASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Gm13521-201ENSMUST00000118922 866 ntBASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Gm12642-201ENSMUST00000121098 876 ntBASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Gm15843-201ENSMUST00000146593 529 ntBASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Gm16027-201ENSMUST00000161618 758 ntBASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Gm18562-201ENSMUST00000209949 915 ntBASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Gm45112-201ENSMUST00000208576 5125 ntBASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Gm18451-201ENSMUST00000196759 1719 ntBASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Gm43515-201ENSMUST00000197930 2141 ntBASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Mbnl2-203ENSMUST00000226800 3328 ntBASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Chmp4bQ9D8B3 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Chmp4bQ9D8B3 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Chmp4bQ9D8B3 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Chmp4bQ9D8B3 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Chmp4bQ9D8B3 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Gm23484-201ENSMUST00000104178 131 ntBASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Gm23529-201ENSMUST00000104562 132 ntBASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Gm5839-201ENSMUST00000182835 1007 ntBASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Gm43590-201ENSMUST00000195987 387 ntBASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Gm5708-201ENSMUST00000196289 886 ntBASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Gm7285-201ENSMUST00000198801 580 ntBASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Gm45446-201ENSMUST00000209348 216 ntBASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Gm45399-201ENSMUST00000209955 1016 ntBASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 AC124778.1-201ENSMUST00000216013 162 ntBASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Gm46379-201ENSMUST00000222551 265 ntBASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 AC164437.5-201ENSMUST00000227235 4414 ntBASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Gm7562-201ENSMUST00000210502 2537 ntBASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chmp4bQ9D8B3 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Chmp4bQ9D8B3 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Chmp4bQ9D8B3 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Chmp4bQ9D8B3 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Chmp4bQ9D8B3 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC9.26□□□□□ -0.93
Chmp4bQ9D8B3 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Chmp4bQ9D8B3 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Chmp4bQ9D8B3 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Chmp4bQ9D8B3 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms