Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Gm17205-201ENSMUST00000168370 1207 ntBASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 AC125543.2-201ENSMUST00000222114 105 ntBASIC8.29□□□□□ -1.08
Smc1aQ9CU62 CT030170.7-201ENSMUST00000223372 103 ntBASIC8.29□□□□□ -1.08
Smc1aQ9CU62 AC099629.1-201ENSMUST00000226778 464 ntBASIC8.29□□□□□ -1.08
Smc1aQ9CU62 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 AC124414.1-201ENSMUST00000218033 2946 ntBASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm11855-201ENSMUST00000121562 1869 ntBASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm12919-201ENSMUST00000119855 1594 ntBASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 AC159002.2-201ENSMUST00000228843 4874 ntBASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm12851-201ENSMUST00000117920 421 ntBASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm24300-201ENSMUST00000177809 109 ntBASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm24017-201ENSMUST00000178726 109 ntBASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm23952-201ENSMUST00000179380 109 ntBASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm27866-201ENSMUST00000184459 171 ntBASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm29355-201ENSMUST00000188178 697 ntBASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm28953-201ENSMUST00000188336 697 ntBASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm20788-201ENSMUST00000190538 697 ntBASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm37395-201ENSMUST00000194721 697 ntBASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm26413-201ENSMUST00000196783 126 ntBASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm18559-201ENSMUST00000208249 604 ntBASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 AC154487.1-201ENSMUST00000224649 226 ntBASIC8.28□□□□□ -1.08
Smc1aQ9CU62 AC159205.7-201ENSMUST00000225988 692 ntBASIC8.28□□□□□ -1.08
Smc1aQ9CU62 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm45084-201ENSMUST00000207096 1957 ntBASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Smc1aQ9CU62 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC8.28□□□□□ -1.08
Smc1aQ9CU62 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC8.27□□□□□ -1.08
Smc1aQ9CU62 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Smc1aQ9CU62 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Smc1aQ9CU62 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Smc1aQ9CU62 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Smc1aQ9CU62 Gm30698-201ENSMUST00000214789 3198 ntBASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Mir669e-201ENSMUST00000117003 119 ntBASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Gm13526-201ENSMUST00000117970 189 ntBASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Gm25780-201ENSMUST00000122528 253 ntBASIC8.27□□□□□ -1.09
Smc1aQ9CU62 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Gm5147-201ENSMUST00000185999 794 ntBASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC8.27□□□□□ -1.09
Smc1aQ9CU62 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC8.27□□□□□ -1.09
Smc1aQ9CU62 AC147245.1-201ENSMUST00000223294 677 ntBASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Gcnt2-204ENSMUST00000223570 335 ntBASIC8.27□□□□□ -1.09
Smc1aQ9CU62 CT009733.1-202ENSMUST00000224941 441 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms