Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm45512-201ENSMUST00000210432 1553 ntBASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Gm13988-201ENSMUST00000119363 288 ntBASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Gm28142-201ENSMUST00000186899 698 ntBASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Gm21577-201ENSMUST00000190823 697 ntBASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Gm3103-201ENSMUST00000198073 752 ntBASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Gm2505-201ENSMUST00000200413 825 ntBASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Gm42573-201ENSMUST00000202327 478 ntBASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Gm29977-201ENSMUST00000206804 724 ntBASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Gm45888-201ENSMUST00000212348 1229 ntBASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 AC165154.2-201ENSMUST00000227310 336 ntBASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 AC139209.2-201ENSMUST00000227680 1208 ntBASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 AC107453.3-201ENSMUST00000228205 639 ntBASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rpa3Q9CQ71 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Gm6493-201ENSMUST00000159889 1786 ntBASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Gm3883-201ENSMUST00000098119 3229 ntBASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Gm43168-201ENSMUST00000201039 1612 ntBASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Gm22438-201ENSMUST00000104049 132 ntBASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Gm13313-201ENSMUST00000118938 1084 ntBASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Gm13545-201ENSMUST00000119044 482 ntBASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Gm23222-201ENSMUST00000158117 76 ntBASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 AC118006.3-201ENSMUST00000223948 1176 ntBASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 AC154487.1-201ENSMUST00000224649 226 ntBASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 AC164294.1-201ENSMUST00000224682 688 ntBASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Gm20900-201ENSMUST00000078729 472 ntBASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Gm37364-201ENSMUST00000192533 3920 ntBASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rpa3Q9CQ71 CT025639.1-201ENSMUST00000223906 1375 ntBASIC7.71□□□□□ -1.17
Rpa3Q9CQ71 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Rpa3Q9CQ71 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC7.71□□□□□ -1.17
Rpa3Q9CQ71 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
Rpa3Q9CQ71 Gm43581-201ENSMUST00000196766 2864 ntBASIC7.71□□□□□ -1.17
Rpa3Q9CQ71 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Rpa3Q9CQ71 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Rpa3Q9CQ71 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC7.71□□□□□ -1.17
Rpa3Q9CQ71 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rpa3Q9CQ71 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Rpa3Q9CQ71 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rpa3Q9CQ71 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.18
Rpa3Q9CQ71 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rpa3Q9CQ71 Gm6181-201ENSMUST00000117187 264 ntBASIC7.71□□□□□ -1.18
Rpa3Q9CQ71 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Rpa3Q9CQ71 Gm11880-201ENSMUST00000117612 399 ntBASIC7.71□□□□□ -1.18
Rpa3Q9CQ71 Gm12710-201ENSMUST00000119011 216 ntBASIC7.71□□□□□ -1.18
Rpa3Q9CQ71 Gm11850-201ENSMUST00000119679 479 ntBASIC7.71□□□□□ -1.18
Rpa3Q9CQ71 Defa-ps10-201ENSMUST00000121649 171 ntBASIC7.71□□□□□ -1.18
Rpa3Q9CQ71 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms