Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Use1Q9CQ56 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Gm12445-201ENSMUST00000117947 885 ntBASIC6.9□□□□□ -1.3
Use1Q9CQ56 Gm12710-201ENSMUST00000119011 216 ntBASIC6.9□□□□□ -1.3
Use1Q9CQ56 Gm5255-201ENSMUST00000120125 642 ntBASIC6.9□□□□□ -1.3
Use1Q9CQ56 Gm14830-201ENSMUST00000121899 700 ntBASIC6.9□□□□□ -1.3
Use1Q9CQ56 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Gm22342-201ENSMUST00000122647 298 ntBASIC6.9□□□□□ -1.3
Use1Q9CQ56 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Gm23117-201ENSMUST00000158482 108 ntBASIC6.9□□□□□ -1.3
Use1Q9CQ56 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC6.9□□□□□ -1.3
Use1Q9CQ56 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Mir6415-201ENSMUST00000184064 100 ntBASIC6.9□□□□□ -1.3
Use1Q9CQ56 Gm27542-201ENSMUST00000184184 256 ntBASIC6.9□□□□□ -1.3
Use1Q9CQ56 Gm21181-201ENSMUST00000186249 330 ntBASIC6.9□□□□□ -1.3
Use1Q9CQ56 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Cnih4-205ENSMUST00000193907 531 ntTSL 2 BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Gm42997-201ENSMUST00000196074 918 ntTSL 3 BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Gm8925-201ENSMUST00000197212 763 ntBASIC6.9□□□□□ -1.3
Use1Q9CQ56 Gm7285-201ENSMUST00000198801 580 ntBASIC6.9□□□□□ -1.3
Use1Q9CQ56 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC6.9□□□□□ -1.3
Use1Q9CQ56 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Use1Q9CQ56 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC6.9□□□□□ -1.3
Use1Q9CQ56 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Olfr664-202ENSMUST00000211596 921 ntAPPRIS ALT2 BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Gm45712-201ENSMUST00000212417 335 ntBASIC6.9□□□□□ -1.3
Use1Q9CQ56 AC153845.1-201ENSMUST00000213596 428 ntBASIC6.9□□□□□ -1.3
Use1Q9CQ56 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC6.9□□□□□ -1.3
Use1Q9CQ56 AC238940.2-201ENSMUST00000224202 330 ntBASIC6.9□□□□□ -1.3
Use1Q9CQ56 AC158954.1-201ENSMUST00000228272 1006 ntBASIC6.9□□□□□ -1.3
Use1Q9CQ56 AC154627.1-201ENSMUST00000228799 1286 ntBASIC6.9□□□□□ -1.3
Use1Q9CQ56 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Use1Q9CQ56 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Olfr888-201ENSMUST00000075228 945 ntBASIC6.9□□□□□ -1.3
Use1Q9CQ56 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Gm11853-201ENSMUST00000119687 1384 ntBASIC6.9□□□□□ -1.31
Use1Q9CQ56 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Use1Q9CQ56 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC6.9□□□□□ -1.31
Use1Q9CQ56 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC6.9□□□□□ -1.31
Use1Q9CQ56 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Use1Q9CQ56 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Use1Q9CQ56 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
Use1Q9CQ56 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Use1Q9CQ56 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Use1Q9CQ56 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Use1Q9CQ56 Gm43211-201ENSMUST00000196901 1899 ntBASIC6.9□□□□□ -1.31
Use1Q9CQ56 AC174797.5-201ENSMUST00000225055 1860 ntBASIC6.9□□□□□ -1.31
Use1Q9CQ56 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Use1Q9CQ56 AC118639.1-203ENSMUST00000228425 2016 ntBASIC6.89□□□□□ -1.31
Use1Q9CQ56 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Use1Q9CQ56 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Use1Q9CQ56 AC122426.2-201ENSMUST00000216522 2947 ntBASIC6.89□□□□□ -1.31
Use1Q9CQ56 Gm45887-201ENSMUST00000212672 2998 ntBASIC6.89□□□□□ -1.31
Use1Q9CQ56 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Gm5970-201ENSMUST00000131638 1216 ntBASIC6.89□□□□□ -1.31
Use1Q9CQ56 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Ighv1-62-2-201ENSMUST00000163467 302 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Ighv1-71-201ENSMUST00000166645 302 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Gm8974-201ENSMUST00000175770 479 ntBASIC6.89□□□□□ -1.31
Use1Q9CQ56 Mir8099-2-201ENSMUST00000183568 127 ntBASIC6.89□□□□□ -1.31
Use1Q9CQ56 Mir8099-1-201ENSMUST00000184238 127 ntBASIC6.89□□□□□ -1.31
Use1Q9CQ56 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Gm38203-201ENSMUST00000191815 245 ntBASIC6.89□□□□□ -1.31
Use1Q9CQ56 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC6.89□□□□□ -1.31
Use1Q9CQ56 Mir1897-202ENSMUST00000198006 79 ntBASIC6.89□□□□□ -1.31
Use1Q9CQ56 Gm18207-201ENSMUST00000205486 526 ntBASIC6.89□□□□□ -1.31
Use1Q9CQ56 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Use1Q9CQ56 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Use1Q9CQ56 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC6.89□□□□□ -1.31
Use1Q9CQ56 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms