Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Tlr3Q99MB1 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Tlr3Q99MB1 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Tlr3Q99MB1 Gm20731-201ENSMUST00000193462 2288 ntBASIC8.11□□□□□ -1.11
Tlr3Q99MB1 Supt20-202ENSMUST00000170552 1968 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Tlr3Q99MB1 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Tlr3Q99MB1 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Tlr3Q99MB1 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC8.11□□□□□ -1.11
Tlr3Q99MB1 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Tlr3Q99MB1 AC154806.2-201ENSMUST00000227212 2385 ntBASIC8.11□□□□□ -1.11
Tlr3Q99MB1 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Tlr3Q99MB1 Gm37321-201ENSMUST00000195742 1872 ntBASIC8.11□□□□□ -1.11
Tlr3Q99MB1 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Tlr3Q99MB1 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Tlr3Q99MB1 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm26831-201ENSMUST00000181458 1380 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm37510-201ENSMUST00000194151 4762 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm43526-201ENSMUST00000196666 1565 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm43534-201ENSMUST00000197685 2853 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm13352-201ENSMUST00000117515 262 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm15225-201ENSMUST00000120449 1017 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm11895-201ENSMUST00000122165 467 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm26455-201ENSMUST00000175300 92 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm7763-201ENSMUST00000182220 1006 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm28894-201ENSMUST00000185214 615 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm38337-201ENSMUST00000193986 599 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm37369-201ENSMUST00000194179 615 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm43044-201ENSMUST00000198091 379 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 AC161250.1-201ENSMUST00000213426 1111 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 AC153532.1-201ENSMUST00000218126 1111 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm3213-201ENSMUST00000219296 441 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm32899-201ENSMUST00000219694 207 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm45925-202ENSMUST00000219904 1136 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 AC134414.1-201ENSMUST00000228499 1221 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm37483-201ENSMUST00000194382 1484 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm43331-201ENSMUST00000197991 1689 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Gm42866-201ENSMUST00000195919 3304 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 AC192333.5-201ENSMUST00000224620 2350 ntBASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC8.1□□□□□ -1.11
Tlr3Q99MB1 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
Tlr3Q99MB1 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Tlr3Q99MB1 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Tlr3Q99MB1 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Tlr3Q99MB1 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Tlr3Q99MB1 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Tlr3Q99MB1 Gm37403-201ENSMUST00000193775 3521 ntBASIC8.09□□□□□ -1.11
Tlr3Q99MB1 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Tlr3Q99MB1 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Tlr3Q99MB1 Gm12632-201ENSMUST00000121223 495 ntBASIC8.09□□□□□ -1.11
Tlr3Q99MB1 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms