Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Aqp9-203ENSMUST00000113570 1712 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm14509-201ENSMUST00000117312 1286 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm13858-201ENSMUST00000118862 671 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm5761-201ENSMUST00000119238 834 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm13622-201ENSMUST00000120658 433 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm12632-201ENSMUST00000121223 495 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm15730-201ENSMUST00000121828 415 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm14048-201ENSMUST00000121864 1268 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC7.14□□□□□ -1.27
Clrn1Q8K445 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Mir1932-201ENSMUST00000157390 90 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm24883-201ENSMUST00000158391 281 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm22670-201ENSMUST00000158724 143 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm2951-201ENSMUST00000169447 490 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm22254-201ENSMUST00000179186 110 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm26784-201ENSMUST00000181666 410 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Mir8095-201ENSMUST00000185103 129 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm9451-201ENSMUST00000188491 604 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm19028-201ENSMUST00000189614 1873 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm6123-201ENSMUST00000193658 1069 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm37481-201ENSMUST00000195176 403 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm43023-201ENSMUST00000197583 2106 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm26413-202ENSMUST00000198972 127 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm43769-201ENSMUST00000201871 4323 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm43974-201ENSMUST00000205080 684 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 AC154141.1-201ENSMUST00000208403 4136 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm35392-201ENSMUST00000209934 2121 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm9249-201ENSMUST00000221420 578 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 AC211878.6-201ENSMUST00000221896 358 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 AC163041.1-201ENSMUST00000221984 133 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 AC154747.4-202ENSMUST00000223826 852 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 AC080021.1-201ENSMUST00000228104 700 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm45807-201ENSMUST00000209142 2874 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm20731-201ENSMUST00000193462 2288 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm38302-201ENSMUST00000191676 2076 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 AC107757.2-201ENSMUST00000226370 1466 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 AC166341.5-201ENSMUST00000222206 1400 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm42549-201ENSMUST00000202392 7004 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm12072-201ENSMUST00000118293 715 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm11416-201ENSMUST00000119111 863 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm13924-201ENSMUST00000119899 486 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm24530-201ENSMUST00000157948 288 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms