Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Tfpi-206ENSMUST00000111718 2027 ntAPPRIS P2 TSL 5 BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Oacyl-201ENSMUST00000115097 3431 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 AC123705.1-201ENSMUST00000222512 2058 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gucy2c-201ENSMUST00000032338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Zfp57-212ENSMUST00000174672 2597 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm43161-201ENSMUST00000197020 1688 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Igkv12-89-201ENSMUST00000103335 335 ntAPPRIS ALT2 BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Ucma-202ENSMUST00000115010 847 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Zscan30-201ENSMUST00000115829 484 ntTSL 2 BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm13925-201ENSMUST00000117315 243 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm16463-201ENSMUST00000120527 721 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm15160-201ENSMUST00000120553 907 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm5398-201ENSMUST00000121933 984 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm14907-201ENSMUST00000121948 854 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm40-201ENSMUST00000122131 660 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm6568-201ENSMUST00000122274 697 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm12989-201ENSMUST00000122331 731 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm4764-201ENSMUST00000130207 1233 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Itih5l-ps-202ENSMUST00000148862 808 ntTSL 3 BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm14573-201ENSMUST00000150544 451 ntTSL 2 BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 U2af1l4-204ENSMUST00000163464 651 ntTSL 5 BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm17258-201ENSMUST00000168462 1266 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Spanxn4-201ENSMUST00000172433 424 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm25145-201ENSMUST00000177640 110 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm24417-201ENSMUST00000178123 79 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm24653-201ENSMUST00000178541 79 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm25934-201ENSMUST00000178642 79 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 1700009J07Rik-201ENSMUST00000178996 912 ntTSL 5 BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Mir124-2hg-205ENSMUST00000189467 173 ntTSL 5 BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm37979-201ENSMUST00000193065 712 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm42625-201ENSMUST00000198611 922 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm43344-201ENSMUST00000198723 1229 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 D830044I16Rik-205ENSMUST00000206296 845 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm44773-201ENSMUST00000207374 557 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 AC157570.2-201ENSMUST00000219091 700 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 AC165254.1-203ENSMUST00000222925 574 ntTSL 3 BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 AC158983.1-201ENSMUST00000225691 221 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Ucma-201ENSMUST00000027978 756 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Glt8d2-202ENSMUST00000065815 1240 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Mir16-2-201ENSMUST00000083672 95 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Cst7-201ENSMUST00000089200 986 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm43497-201ENSMUST00000201137 2316 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm6327-201ENSMUST00000171185 1335 ntBASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Pcdhb7Q8CDY9 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Atxn7l1-213ENSMUST00000154742 3548 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Gm40603-202ENSMUST00000219975 1642 ntTSL 5 BASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Clnk-201ENSMUST00000169819 1700 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Clnk-202ENSMUST00000171633 1700 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Gm42589-201ENSMUST00000199097 1751 ntBASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Gm37121-201ENSMUST00000192219 2556 ntBASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Aldh7a1-208ENSMUST00000174518 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Cblb-205ENSMUST00000227756 3378 ntBASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Ctnna3-203ENSMUST00000105441 2907 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Gm23127-201ENSMUST00000104261 130 ntBASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Gm13542-201ENSMUST00000118484 637 ntBASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Gm12421-201ENSMUST00000119071 307 ntBASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Gm13005-201ENSMUST00000119518 585 ntBASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Gm12044-201ENSMUST00000120335 213 ntBASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 9430024E24Rik-201ENSMUST00000130532 713 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Olfr330-201ENSMUST00000134055 1134 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Gm15086-201ENSMUST00000143110 573 ntTSL 5 BASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Gm11999-201ENSMUST00000145789 813 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Gm6851-201ENSMUST00000154478 395 ntBASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC8.43□□□□□ -1.06
Pcdhb7Q8CDY9 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC8.43□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms