Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm37785-201ENSMUST00000195783 2408 ntBASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Gm26480-201ENSMUST00000122619 297 ntBASIC8.73□□□□□ -1.01
Vps54Q5SPW0 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Gm44508-201ENSMUST00000206943 1157 ntBASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Gm45100-201ENSMUST00000209153 391 ntBASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Gm18860-201ENSMUST00000212029 764 ntBASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Gm17611-202ENSMUST00000220613 814 ntBASIC8.73□□□□□ -1.01
Vps54Q5SPW0 AL591207.2-201ENSMUST00000222991 337 ntBASIC8.73□□□□□ -1.01
Vps54Q5SPW0 AC156574.1-201ENSMUST00000227084 452 ntBASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Mir455-201ENSMUST00000093594 82 ntBASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 AC122356.1-202ENSMUST00000227328 2758 ntBASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 AC159624.1-201ENSMUST00000217762 1344 ntBASIC8.73□□□□□ -1.01
Vps54Q5SPW0 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Vps54Q5SPW0 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Gm44777-201ENSMUST00000205941 4052 ntBASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Gm12944-201ENSMUST00000119262 463 ntBASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Gm11726-201ENSMUST00000121028 424 ntBASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Gm14990-201ENSMUST00000122354 445 ntBASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Gm22262-201ENSMUST00000158713 86 ntBASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Gm17205-201ENSMUST00000168370 1207 ntBASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Mir6357-201ENSMUST00000184246 104 ntBASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Gm8101-201ENSMUST00000192796 478 ntBASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Gm44722-201ENSMUST00000206473 436 ntBASIC8.72□□□□□ -1.01
Vps54Q5SPW0 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Gm36758-201ENSMUST00000222594 310 ntBASIC8.72□□□□□ -1.01
Vps54Q5SPW0 CT025630.2-201ENSMUST00000228293 487 ntBASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Gm45793-201ENSMUST00000207900 1342 ntBASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Gm19801-201ENSMUST00000218231 1882 ntBASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 CT573019.1-201ENSMUST00000227762 1689 ntBASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC8.72□□□□□ -1.01
Vps54Q5SPW0 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Vps54Q5SPW0 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Vps54Q5SPW0 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms