Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CiitaP79621 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CiitaP79621 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CiitaP79621 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC8.02□□□□□ -1.13
CiitaP79621 Gm43314-201ENSMUST00000196744 2231 ntBASIC8.02□□□□□ -1.13
CiitaP79621 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CiitaP79621 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
CiitaP79621 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CiitaP79621 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CiitaP79621 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CiitaP79621 Gm45793-201ENSMUST00000207900 1342 ntBASIC8.02□□□□□ -1.13
CiitaP79621 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
CiitaP79621 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CiitaP79621 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
CiitaP79621 Gm6640-201ENSMUST00000120629 1587 ntBASIC8.01□□□□□ -1.13
CiitaP79621 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CiitaP79621 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CiitaP79621 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CiitaP79621 Gm10259-201ENSMUST00000091289 1590 ntBASIC8.01□□□□□ -1.13
CiitaP79621 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CiitaP79621 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC8.01□□□□□ -1.13
CiitaP79621 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC8.01□□□□□ -1.13
CiitaP79621 Gm45182-201ENSMUST00000207579 2404 ntBASIC8.01□□□□□ -1.13
CiitaP79621 Gm17841-201ENSMUST00000210711 2425 ntBASIC8.01□□□□□ -1.13
CiitaP79621 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC8.01□□□□□ -1.13
CiitaP79621 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CiitaP79621 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CiitaP79621 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CiitaP79621 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC8.01□□□□□ -1.13
CiitaP79621 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC8.01□□□□□ -1.13
CiitaP79621 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
CiitaP79621 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
CiitaP79621 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
CiitaP79621 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
CiitaP79621 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
CiitaP79621 Gm14000-201ENSMUST00000118670 233 ntBASIC8.01□□□□□ -1.13
CiitaP79621 Gm7244-201ENSMUST00000164658 455 ntBASIC8.01□□□□□ -1.13
CiitaP79621 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
CiitaP79621 Gm27684-201ENSMUST00000183778 80 ntBASIC8.01□□□□□ -1.13
CiitaP79621 Mir6769b-201ENSMUST00000184793 60 ntBASIC8.01□□□□□ -1.13
CiitaP79621 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CiitaP79621 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC8.01□□□□□ -1.13
CiitaP79621 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC8.01□□□□□ -1.13
CiitaP79621 Gm37017-201ENSMUST00000195266 747 ntBASIC8.01□□□□□ -1.13
CiitaP79621 Gm4870-201ENSMUST00000198525 1251 ntBASIC8.01□□□□□ -1.13
CiitaP79621 Gm8539-201ENSMUST00000199822 501 ntBASIC8.01□□□□□ -1.13
CiitaP79621 Gm42723-201ENSMUST00000199966 1044 ntBASIC8.01□□□□□ -1.13
CiitaP79621 CT025639.2-201ENSMUST00000224440 1220 ntBASIC8.01□□□□□ -1.13
CiitaP79621 AC134869.2-201ENSMUST00000225788 421 ntBASIC8.01□□□□□ -1.13
CiitaP79621 Gm22748-201ENSMUST00000082493 136 ntBASIC8.01□□□□□ -1.13
CiitaP79621 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
CiitaP79621 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CiitaP79621 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CiitaP79621 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CiitaP79621 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
CiitaP79621 AC166574.5-201ENSMUST00000227438 1432 ntBASIC8.01□□□□□ -1.13
CiitaP79621 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC8.01□□□□□ -1.13
CiitaP79621 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CiitaP79621 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC8.01□□□□□ -1.13
CiitaP79621 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC8.01□□□□□ -1.13
CiitaP79621 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CiitaP79621 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
CiitaP79621 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CiitaP79621 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
CiitaP79621 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CiitaP79621 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CiitaP79621 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
CiitaP79621 Gm12346-201ENSMUST00000121455 2255 ntBASIC8□□□□□ -1.13
CiitaP79621 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC8□□□□□ -1.13
CiitaP79621 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC8□□□□□ -1.13
CiitaP79621 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
CiitaP79621 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CiitaP79621 AC164433.1-201ENSMUST00000226138 1544 ntBASIC8□□□□□ -1.13
CiitaP79621 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC8□□□□□ -1.13
CiitaP79621 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CiitaP79621 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CiitaP79621 Gm23437-201ENSMUST00000104036 127 ntBASIC8□□□□□ -1.13
CiitaP79621 Gm22438-201ENSMUST00000104049 132 ntBASIC8□□□□□ -1.13
CiitaP79621 Gm25631-201ENSMUST00000104390 130 ntBASIC8□□□□□ -1.13
CiitaP79621 Gm17170-201ENSMUST00000112785 316 ntBASIC8□□□□□ -1.13
CiitaP79621 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CiitaP79621 Gm15484-201ENSMUST00000118871 828 ntBASIC8□□□□□ -1.13
CiitaP79621 Gm13545-201ENSMUST00000119044 482 ntBASIC8□□□□□ -1.13
CiitaP79621 Gm5255-201ENSMUST00000120125 642 ntBASIC8□□□□□ -1.13
CiitaP79621 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC8□□□□□ -1.13
CiitaP79621 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CiitaP79621 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC8□□□□□ -1.13
CiitaP79621 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CiitaP79621 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC8□□□□□ -1.13
CiitaP79621 Mir7084-201ENSMUST00000183876 70 ntBASIC8□□□□□ -1.13
CiitaP79621 Gm19035-202ENSMUST00000194575 959 ntBASIC8□□□□□ -1.13
CiitaP79621 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC8□□□□□ -1.13
CiitaP79621 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC8□□□□□ -1.13
CiitaP79621 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC8□□□□□ -1.13
CiitaP79621 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC8□□□□□ -1.13
CiitaP79621 AC159205.2-201ENSMUST00000223759 816 ntBASIC8□□□□□ -1.13
CiitaP79621 AV026068-219ENSMUST00000224148 933 ntBASIC8□□□□□ -1.13
CiitaP79621 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CiitaP79621 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC8□□□□□ -1.13
CiitaP79621 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 172.2 ms