Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shmt1P50431 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
Shmt1P50431 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC7.87□□□□□ -1.15
Shmt1P50431 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shmt1P50431 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Shmt1P50431 Gm10623-201ENSMUST00000209081 2639 ntBASIC7.87□□□□□ -1.15
Shmt1P50431 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Shmt1P50431 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
Shmt1P50431 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
Shmt1P50431 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Shmt1P50431 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Shmt1P50431 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Shmt1P50431 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shmt1P50431 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Shmt1P50431 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
Shmt1P50431 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shmt1P50431 Gm10744-201ENSMUST00000220184 2706 ntBASIC7.87□□□□□ -1.15
Shmt1P50431 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Shmt1P50431 Gm45201-201ENSMUST00000207187 2679 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 AC159193.3-201ENSMUST00000221902 2622 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 Gm37460-201ENSMUST00000191796 2249 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 AC158605.4-201ENSMUST00000219013 3361 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Shmt1P50431 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Shmt1P50431 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Shmt1P50431 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Shmt1P50431 Gm26016-201ENSMUST00000104403 129 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 Gm12459-201ENSMUST00000120659 356 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 Gm11882-201ENSMUST00000121463 506 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC7.86□□□□□ -1.15
Shmt1P50431 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC7.86□□□□□ -1.15
Shmt1P50431 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC7.86□□□□□ -1.15
Shmt1P50431 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC7.86□□□□□ -1.15
Shmt1P50431 Gm3611-201ENSMUST00000173687 877 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 Gm20702-201ENSMUST00000176181 460 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Shmt1P50431 Gm29036-201ENSMUST00000189967 877 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 Gm29755-201ENSMUST00000196976 948 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC7.86□□□□□ -1.15
Shmt1P50431 Gm19211-201ENSMUST00000200251 1206 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 Gm44192-201ENSMUST00000204195 556 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC7.86□□□□□ -1.15
Shmt1P50431 Gm18559-201ENSMUST00000208249 604 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Shmt1P50431 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC7.86□□□□□ -1.15
Shmt1P50431 Gm7943-201ENSMUST00000212078 1034 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC7.86□□□□□ -1.15
Shmt1P50431 AC159886.1-201ENSMUST00000217099 1091 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC7.86□□□□□ -1.15
Shmt1P50431 AC102542.1-201ENSMUST00000225204 1138 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Shmt1P50431 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Shmt1P50431 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Shmt1P50431 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Shmt1P50431 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC7.86□□□□□ -1.15
Shmt1P50431 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC7.86□□□□□ -1.15
Shmt1P50431 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC7.86□□□□□ -1.15
Shmt1P50431 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Shmt1P50431 CT571245.1-201ENSMUST00000218642 3465 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 Gm18701-201ENSMUST00000188281 1536 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
Shmt1P50431 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC7.86□□□□□ -1.15
Shmt1P50431 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Shmt1P50431 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
Shmt1P50431 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Shmt1P50431 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Shmt1P50431 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
Shmt1P50431 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Shmt1P50431 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
Shmt1P50431 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Shmt1P50431 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Shmt1P50431 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Shmt1P50431 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Shmt1P50431 Gm37382-201ENSMUST00000193032 1596 ntBASIC7.85□□□□□ -1.15
Shmt1P50431 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Shmt1P50431 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Shmt1P50431 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Shmt1P50431 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Shmt1P50431 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Shmt1P50431 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Shmt1P50431 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC7.85□□□□□ -1.15
Shmt1P50431 AC164433.1-201ENSMUST00000226138 1544 ntBASIC7.85□□□□□ -1.15
Shmt1P50431 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Shmt1P50431 Gm15153-201ENSMUST00000119867 274 ntBASIC7.85□□□□□ -1.15
Shmt1P50431 Gm15842-201ENSMUST00000120513 618 ntBASIC7.85□□□□□ -1.15
Shmt1P50431 Gm6027-201ENSMUST00000121467 756 ntBASIC7.85□□□□□ -1.15
Shmt1P50431 Gm13282-201ENSMUST00000121577 545 ntBASIC7.85□□□□□ -1.15
Shmt1P50431 Gm4887-201ENSMUST00000122230 1053 ntBASIC7.85□□□□□ -1.15
Shmt1P50431 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC7.85□□□□□ -1.15
Shmt1P50431 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Shmt1P50431 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
Shmt1P50431 Gm17205-201ENSMUST00000168370 1207 ntBASIC7.85□□□□□ -1.15
Shmt1P50431 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Shmt1P50431 Gm3650-201ENSMUST00000180600 747 ntBASIC7.85□□□□□ -1.15
Shmt1P50431 Gm27373-201ENSMUST00000184017 184 ntBASIC7.85□□□□□ -1.15
Shmt1P50431 Gm27866-201ENSMUST00000184459 171 ntBASIC7.85□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms