Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 AC115760.1-201ENSMUST00000225160 1327 ntBASIC8.22□□□□□ -1.09
Brca1P48754 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Brca1P48754 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Brca1P48754 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Brca1P48754 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Brca1P48754 Dlk1-206ENSMUST00000109846 4106 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Brca1P48754 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Brca1P48754 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Brca1P48754 Nrip1-202ENSMUST00000121927 7868 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Brca1P48754 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Brca1P48754 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Brca1P48754 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Brca1P48754 n-R5s178-201ENSMUST00000104249 114 ntBASIC8.22□□□□□ -1.09
Brca1P48754 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Brca1P48754 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Brca1P48754 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Brca1P48754 Gm24286-201ENSMUST00000157632 128 ntBASIC8.22□□□□□ -1.09
Brca1P48754 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Brca1P48754 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC8.22□□□□□ -1.09
Brca1P48754 Gm18006-201ENSMUST00000177411 662 ntBASIC8.22□□□□□ -1.09
Brca1P48754 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC8.22□□□□□ -1.09
Brca1P48754 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC8.22□□□□□ -1.09
Brca1P48754 Gm33178-201ENSMUST00000212090 257 ntBASIC8.22□□□□□ -1.09
Brca1P48754 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC8.22□□□□□ -1.09
Brca1P48754 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC8.22□□□□□ -1.09
Brca1P48754 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Brca1P48754 Gm6990-201ENSMUST00000086830 348 ntBASIC8.22□□□□□ -1.09
Brca1P48754 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Brca1P48754 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC8.22□□□□□ -1.09
Brca1P48754 Pcdh15-241ENSMUST00000195531 5241 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Brca1P48754 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Brca1P48754 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Brca1P48754 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Brca1P48754 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Brca1P48754 Dgkh-204ENSMUST00000227767 3319 ntBASIC8.21□□□□□ -1.09
Brca1P48754 Nucb1-210ENSMUST00000211765 4853 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
Brca1P48754 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC8.21□□□□□ -1.09
Brca1P48754 Kansl3-204ENSMUST00000185912 4527 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Brca1P48754 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Brca1P48754 Gm37159-201ENSMUST00000192720 3605 ntBASIC8.21□□□□□ -1.09
Brca1P48754 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
Brca1P48754 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Brca1P48754 Rnf165-201ENSMUST00000026494 7300 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Brca1P48754 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Brca1P48754 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Brca1P48754 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Brca1P48754 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Brca1P48754 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Brca1P48754 Morc2b-201ENSMUST00000053896 3712 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Brca1P48754 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Brca1P48754 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Brca1P48754 Gm15311-201ENSMUST00000119682 282 ntBASIC8.21□□□□□ -1.1
Brca1P48754 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC8.21□□□□□ -1.1
Brca1P48754 Gm15305-201ENSMUST00000120354 288 ntBASIC8.21□□□□□ -1.1
Brca1P48754 Gm13237-201ENSMUST00000122151 635 ntBASIC8.21□□□□□ -1.1
Brca1P48754 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Brca1P48754 Gm22024-201ENSMUST00000122733 287 ntBASIC8.21□□□□□ -1.1
Brca1P48754 Mir1932-201ENSMUST00000157390 90 ntBASIC8.21□□□□□ -1.1
Brca1P48754 Mir1929-201ENSMUST00000158635 93 ntBASIC8.21□□□□□ -1.1
Brca1P48754 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC8.21□□□□□ -1.1
Brca1P48754 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC8.21□□□□□ -1.1
Brca1P48754 Gm37669-201ENSMUST00000192184 820 ntBASIC8.21□□□□□ -1.1
Brca1P48754 Gm17895-201ENSMUST00000194028 874 ntBASIC8.21□□□□□ -1.1
Brca1P48754 CT025579.4-201ENSMUST00000224598 627 ntBASIC8.21□□□□□ -1.1
Brca1P48754 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Brca1P48754 Prdm15-201ENSMUST00000095849 6346 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.1
Brca1P48754 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Brca1P48754 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC8.21□□□□□ -1.1
Brca1P48754 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC8.21□□□□□ -1.1
Brca1P48754 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC8.21□□□□□ -1.1
Brca1P48754 Blm-202ENSMUST00000170315 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Brca1P48754 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Brca1P48754 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC8.21□□□□□ -1.1
Brca1P48754 Nup188-201ENSMUST00000064447 5710 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Brca1P48754 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Brca1P48754 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Brca1P48754 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Brca1P48754 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brca1P48754 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brca1P48754 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC8.2□□□□□ -1.1
Brca1P48754 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.2□□□□□ -1.1
Brca1P48754 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brca1P48754 Kif1b-201ENSMUST00000030806 6991 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Brca1P48754 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brca1P48754 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brca1P48754 Cdh13-201ENSMUST00000117160 3785 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brca1P48754 BC064078-201ENSMUST00000122939 570 ntBASIC8.2□□□□□ -1.1
Brca1P48754 Mir1953-201ENSMUST00000157866 89 ntBASIC8.2□□□□□ -1.1
Brca1P48754 Gm26528-201ENSMUST00000181965 283 ntBASIC8.2□□□□□ -1.1
Brca1P48754 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC8.2□□□□□ -1.1
Brca1P48754 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC8.2□□□□□ -1.1
Brca1P48754 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC8.2□□□□□ -1.1
Brca1P48754 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC8.2□□□□□ -1.1
Brca1P48754 Gm18469-201ENSMUST00000208850 439 ntBASIC8.2□□□□□ -1.1
Brca1P48754 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC8.2□□□□□ -1.1
Brca1P48754 AC126554.3-201ENSMUST00000223131 493 ntBASIC8.2□□□□□ -1.1
Brca1P48754 Gm2840-201ENSMUST00000048361 411 ntBASIC8.2□□□□□ -1.1
Brca1P48754 Mir106b-201ENSMUST00000083580 82 ntBASIC8.2□□□□□ -1.1
Brca1P48754 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brca1P48754 Gm43331-201ENSMUST00000197991 1689 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms