Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Rfc1P35601 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Rfc1P35601 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Rfc1P35601 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Rfc1P35601 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Rfc1P35601 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Rfc1P35601 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Rfc1P35601 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Rfc1P35601 Gm37423-201ENSMUST00000194246 3342 ntBASIC7.67□□□□□ -1.18
Rfc1P35601 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC7.67□□□□□ -1.18
Rfc1P35601 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Rfc1P35601 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC7.67□□□□□ -1.18
Rfc1P35601 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Rfc1P35601 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
Rfc1P35601 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Rfc1P35601 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Rfc1P35601 Gm5915-201ENSMUST00000116136 454 ntBASIC7.67□□□□□ -1.18
Rfc1P35601 Gm8802-201ENSMUST00000118633 740 ntBASIC7.67□□□□□ -1.18
Rfc1P35601 Gm15355-201ENSMUST00000118929 285 ntBASIC7.67□□□□□ -1.18
Rfc1P35601 Gm11474-201ENSMUST00000120814 277 ntBASIC7.67□□□□□ -1.18
Rfc1P35601 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC7.67□□□□□ -1.18
Rfc1P35601 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC7.67□□□□□ -1.18
Rfc1P35601 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC7.67□□□□□ -1.18
Rfc1P35601 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC7.67□□□□□ -1.18
Rfc1P35601 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Rfc1P35601 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC7.67□□□□□ -1.18
Rfc1P35601 Mir3471-2-201ENSMUST00000174896 102 ntBASIC7.67□□□□□ -1.18
Rfc1P35601 Gm9423-201ENSMUST00000183173 997 ntBASIC7.67□□□□□ -1.18
Rfc1P35601 Mir6999-201ENSMUST00000183498 61 ntBASIC7.67□□□□□ -1.18
Rfc1P35601 Gm29462-201ENSMUST00000191458 288 ntBASIC7.67□□□□□ -1.18
Rfc1P35601 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC7.67□□□□□ -1.18
Rfc1P35601 Gm4536-201ENSMUST00000209157 542 ntBASIC7.67□□□□□ -1.18
Rfc1P35601 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC7.67□□□□□ -1.18
Rfc1P35601 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC7.67□□□□□ -1.18
Rfc1P35601 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Rfc1P35601 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC7.67□□□□□ -1.18
Rfc1P35601 Gm7086-202ENSMUST00000228849 506 ntBASIC7.67□□□□□ -1.18
Rfc1P35601 Llcfc1-201ENSMUST00000031900 741 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Rfc1P35601 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Rfc1P35601 Gm15500-201ENSMUST00000071523 894 ntBASIC7.67□□□□□ -1.18
Rfc1P35601 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
Rfc1P35601 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Rfc1P35601 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Rfc1P35601 AC112680.1-201ENSMUST00000215435 1349 ntBASIC7.67□□□□□ -1.18
Rfc1P35601 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Rfc1P35601 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Rfc1P35601 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Rfc1P35601 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Rfc1P35601 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Rfc1P35601 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Rfc1P35601 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Rfc1P35601 Gm20121-201ENSMUST00000198547 1594 ntBASIC7.67□□□□□ -1.18
Rfc1P35601 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
Rfc1P35601 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Rfc1P35601 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Rfc1P35601 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Rfc1P35601 Gm37967-201ENSMUST00000195634 2665 ntBASIC7.66□□□□□ -1.18
Rfc1P35601 Gm43623-201ENSMUST00000199289 2663 ntBASIC7.66□□□□□ -1.18
Rfc1P35601 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Rfc1P35601 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Rfc1P35601 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Rfc1P35601 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Rfc1P35601 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
Rfc1P35601 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Rfc1P35601 Gm43872-201ENSMUST00000203218 2213 ntBASIC7.66□□□□□ -1.18
Rfc1P35601 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC7.66□□□□□ -1.18
Rfc1P35601 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Rfc1P35601 Gm22271-201ENSMUST00000104035 128 ntBASIC7.66□□□□□ -1.18
Rfc1P35601 Gm22150-201ENSMUST00000104447 135 ntBASIC7.66□□□□□ -1.18
Rfc1P35601 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC7.66□□□□□ -1.18
Rfc1P35601 Gm13160-201ENSMUST00000118441 627 ntBASIC7.66□□□□□ -1.18
Rfc1P35601 Gm12993-201ENSMUST00000119900 479 ntBASIC7.66□□□□□ -1.18
Rfc1P35601 Gm11895-201ENSMUST00000122165 467 ntBASIC7.66□□□□□ -1.18
Rfc1P35601 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Rfc1P35601 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC7.66□□□□□ -1.18
Rfc1P35601 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC7.66□□□□□ -1.18
Rfc1P35601 Defa-ps3-201ENSMUST00000142705 282 ntBASIC7.66□□□□□ -1.18
Rfc1P35601 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Rfc1P35601 Gm22949-201ENSMUST00000158562 105 ntBASIC7.66□□□□□ -1.18
Rfc1P35601 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Rfc1P35601 Gm17051-201ENSMUST00000170787 487 ntBASIC7.66□□□□□ -1.18
Rfc1P35601 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC7.66□□□□□ -1.18
Rfc1P35601 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC7.66□□□□□ -1.18
Rfc1P35601 Gm6750-201ENSMUST00000189273 268 ntBASIC7.66□□□□□ -1.18
Rfc1P35601 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC7.66□□□□□ -1.18
Rfc1P35601 Pisrt1-201ENSMUST00000195532 515 ntBASIC7.66□□□□□ -1.18
Rfc1P35601 Gm44471-201ENSMUST00000197963 100 ntBASIC7.66□□□□□ -1.18
Rfc1P35601 Tmigd3-206ENSMUST00000199977 838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Rfc1P35601 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC7.66□□□□□ -1.18
Rfc1P35601 Gm45800-201ENSMUST00000210331 700 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Rfc1P35601 Gm45432-201ENSMUST00000210391 416 ntBASIC7.66□□□□□ -1.18
Rfc1P35601 Gm45782-201ENSMUST00000212670 366 ntBASIC7.66□□□□□ -1.18
Rfc1P35601 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC7.66□□□□□ -1.18
Rfc1P35601 AC163638.1-201ENSMUST00000224818 392 ntBASIC7.66□□□□□ -1.18
Rfc1P35601 AC137117.3-201ENSMUST00000226265 485 ntBASIC7.66□□□□□ -1.18
Rfc1P35601 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Rfc1P35601 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Rfc1P35601 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Rfc1P35601 Gm6819-201ENSMUST00000185325 1891 ntBASIC7.66□□□□□ -1.18
Rfc1P35601 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC7.66□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms