Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Gm24613-201ENSMUST00000083266 130 ntBASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Gm17137-201ENSMUST00000164106 4371 ntBASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Gm25276-201ENSMUST00000104300 124 ntBASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Gm23323-201ENSMUST00000104471 133 ntBASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Defa-ps7-201ENSMUST00000117139 168 ntBASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Gm16221-201ENSMUST00000117331 393 ntBASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Gm12593-201ENSMUST00000120981 743 ntBASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Gm15586-201ENSMUST00000121218 528 ntBASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Gm37724-201ENSMUST00000195240 1221 ntBASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Gm3103-201ENSMUST00000198073 752 ntBASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Gm43108-201ENSMUST00000200525 293 ntBASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Gm44380-201ENSMUST00000203125 293 ntBASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Gm44508-201ENSMUST00000206943 1157 ntBASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Gm45221-201ENSMUST00000207822 2272 ntBASIC7.98□□□□□ -1.13
Chmp6P0C0A3 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp6P0C0A3 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Gm5903-201ENSMUST00000121836 2325 ntBASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Gm24284-201ENSMUST00000104240 142 ntBASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Trav8-2-201ENSMUST00000130122 337 ntBASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Gm7991-201ENSMUST00000168668 591 ntBASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Gm6536-201ENSMUST00000171180 615 ntBASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Gm20702-201ENSMUST00000176181 460 ntBASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Gm24923-201ENSMUST00000178201 88 ntBASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Gm38254-201ENSMUST00000192276 1009 ntBASIC7.97□□□□□ -1.13
Chmp6P0C0A3 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Gm32842-201ENSMUST00000212653 738 ntBASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 AC102582.1-201ENSMUST00000215376 378 ntBASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 AC154461.4-201ENSMUST00000224878 468 ntBASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
Chmp6P0C0A3 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms