Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcb1Q9Z0H3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcb1Q9Z0H3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Smarcb1Q9Z0H3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Smarcb1Q9Z0H3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcb1Q9Z0H3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcb1Q9Z0H3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcb1Q9Z0H3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcb1Q9Z0H3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcb1Q9Z0H3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcb1Q9Z0H3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Smarcb1Q9Z0H3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Smarcb1Q9Z0H3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcb1Q9Z0H3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcb1Q9Z0H3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.15■□□□□ 0.66
Smarcb1Q9Z0H3 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.15■□□□□ 0.66
Smarcb1Q9Z0H3 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.15■□□□□ 0.66
Smarcb1Q9Z0H3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.15■□□□□ 0.66
Smarcb1Q9Z0H3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcb1Q9Z0H3 Zfp783-201ENSMUST00000095946 670 ntBASIC19.15■□□□□ 0.66
Smarcb1Q9Z0H3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcb1Q9Z0H3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcb1Q9Z0H3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smarcb1Q9Z0H3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Smarcb1Q9Z0H3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
Smarcb1Q9Z0H3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Smarcb1Q9Z0H3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcb1Q9Z0H3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcb1Q9Z0H3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Smarcb1Q9Z0H3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Smarcb1Q9Z0H3 Gm15378-201ENSMUST00000121894 207 ntBASIC19.14■□□□□ 0.65
Smarcb1Q9Z0H3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcb1Q9Z0H3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcb1Q9Z0H3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.14■□□□□ 0.65
Smarcb1Q9Z0H3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcb1Q9Z0H3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Smarcb1Q9Z0H3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcb1Q9Z0H3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.13■□□□□ 0.65
Smarcb1Q9Z0H3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcb1Q9Z0H3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.13■□□□□ 0.65
Smarcb1Q9Z0H3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcb1Q9Z0H3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcb1Q9Z0H3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcb1Q9Z0H3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcb1Q9Z0H3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcb1Q9Z0H3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcb1Q9Z0H3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcb1Q9Z0H3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.12■□□□□ 0.65
Smarcb1Q9Z0H3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcb1Q9Z0H3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcb1Q9Z0H3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcb1Q9Z0H3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Smarcb1Q9Z0H3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Smarcb1Q9Z0H3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcb1Q9Z0H3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcb1Q9Z0H3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcb1Q9Z0H3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcb1Q9Z0H3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcb1Q9Z0H3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcb1Q9Z0H3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Smarcb1Q9Z0H3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.11■□□□□ 0.65
Smarcb1Q9Z0H3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcb1Q9Z0H3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.11■□□□□ 0.65
Smarcb1Q9Z0H3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.11■□□□□ 0.65
Smarcb1Q9Z0H3 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.11■□□□□ 0.65
Smarcb1Q9Z0H3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Smarcb1Q9Z0H3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcb1Q9Z0H3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcb1Q9Z0H3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcb1Q9Z0H3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcb1Q9Z0H3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcb1Q9Z0H3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcb1Q9Z0H3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Smarcb1Q9Z0H3 Gm10252-201ENSMUST00000209541 832 ntBASIC19.1■□□□□ 0.65
Smarcb1Q9Z0H3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.1■□□□□ 0.65
Smarcb1Q9Z0H3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcb1Q9Z0H3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Smarcb1Q9Z0H3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Smarcb1Q9Z0H3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcb1Q9Z0H3 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.09■□□□□ 0.65
Smarcb1Q9Z0H3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Smarcb1Q9Z0H3 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.09■□□□□ 0.65
Smarcb1Q9Z0H3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcb1Q9Z0H3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.09■□□□□ 0.65
Smarcb1Q9Z0H3 Gm38285-201ENSMUST00000192928 922 ntBASIC19.09■□□□□ 0.65
Smarcb1Q9Z0H3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.09■□□□□ 0.65
Smarcb1Q9Z0H3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcb1Q9Z0H3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcb1Q9Z0H3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcb1Q9Z0H3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.09■□□□□ 0.65
Smarcb1Q9Z0H3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smarcb1Q9Z0H3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smarcb1Q9Z0H3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smarcb1Q9Z0H3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smarcb1Q9Z0H3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Smarcb1Q9Z0H3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.08■□□□□ 0.64
Smarcb1Q9Z0H3 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.08■□□□□ 0.64
Smarcb1Q9Z0H3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.08■□□□□ 0.64
Smarcb1Q9Z0H3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcb1Q9Z0H3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms