Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
Cdh17Q9R100 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdh17Q9R100 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdh17Q9R100 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdh17Q9R100 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdh17Q9R100 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdh17Q9R100 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh17Q9R100 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Cdh17Q9R100 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.01■□□□□ 0.47
Cdh17Q9R100 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh17Q9R100 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh17Q9R100 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh17Q9R100 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.01■□□□□ 0.47
Cdh17Q9R100 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.01■□□□□ 0.47
Cdh17Q9R100 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh17Q9R100 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh17Q9R100 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh17Q9R100 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh17Q9R100 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18■□□□□ 0.47
Cdh17Q9R100 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18■□□□□ 0.47
Cdh17Q9R100 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cdh17Q9R100 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh17Q9R100 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdh17Q9R100 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18■□□□□ 0.47
Cdh17Q9R100 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18■□□□□ 0.47
Cdh17Q9R100 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh17Q9R100 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh17Q9R100 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18■□□□□ 0.47
Cdh17Q9R100 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdh17Q9R100 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh17Q9R100 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18■□□□□ 0.47
Cdh17Q9R100 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh17Q9R100 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh17Q9R100 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh17Q9R100 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.99■□□□□ 0.47
Cdh17Q9R100 Reep4-203ENSMUST00000226563 1444 ntBASIC17.99■□□□□ 0.47
Cdh17Q9R100 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh17Q9R100 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh17Q9R100 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh17Q9R100 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh17Q9R100 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh17Q9R100 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cdh17Q9R100 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh17Q9R100 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh17Q9R100 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh17Q9R100 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh17Q9R100 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh17Q9R100 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh17Q9R100 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh17Q9R100 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh17Q9R100 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.98■□□□□ 0.47
Cdh17Q9R100 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.98■□□□□ 0.47
Cdh17Q9R100 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.98■□□□□ 0.47
Cdh17Q9R100 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Cdh17Q9R100 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh17Q9R100 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cdh17Q9R100 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh17Q9R100 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.98■□□□□ 0.47
Cdh17Q9R100 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Cdh17Q9R100 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.98■□□□□ 0.47
Cdh17Q9R100 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh17Q9R100 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh17Q9R100 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh17Q9R100 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh17Q9R100 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh17Q9R100 Gm13534-201ENSMUST00000121169 513 ntBASIC17.97■□□□□ 0.47
Cdh17Q9R100 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh17Q9R100 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh17Q9R100 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.97■□□□□ 0.47
Cdh17Q9R100 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh17Q9R100 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh17Q9R100 Gm9988-201ENSMUST00000069786 435 ntBASIC17.97■□□□□ 0.47
Cdh17Q9R100 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh17Q9R100 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Cdh17Q9R100 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh17Q9R100 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.97■□□□□ 0.47
Cdh17Q9R100 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh17Q9R100 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh17Q9R100 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cdh17Q9R100 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cdh17Q9R100 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh17Q9R100 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh17Q9R100 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh17Q9R100 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Cdh17Q9R100 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Cdh17Q9R100 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh17Q9R100 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cdh17Q9R100 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Cdh17Q9R100 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cdh17Q9R100 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Cdh17Q9R100 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.96■□□□□ 0.46
Cdh17Q9R100 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh17Q9R100 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh17Q9R100 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh17Q9R100 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh17Q9R100 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cdh17Q9R100 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh17Q9R100 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh17Q9R100 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh17Q9R100 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms