Protein–RNA interactions for Protein: Q9JHB3

Timp4, Metalloproteinase inhibitor 4, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp4Q9JHB3 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.23■□□□□ 0.67
Timp4Q9JHB3 Gm22325-201ENSMUST00000158904 308 ntBASIC19.23■□□□□ 0.67
Timp4Q9JHB3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Timp4Q9JHB3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Timp4Q9JHB3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Timp4Q9JHB3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Timp4Q9JHB3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Timp4Q9JHB3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Timp4Q9JHB3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.23■□□□□ 0.67
Timp4Q9JHB3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Timp4Q9JHB3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Timp4Q9JHB3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Timp4Q9JHB3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Timp4Q9JHB3 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.22■□□□□ 0.67
Timp4Q9JHB3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Timp4Q9JHB3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Timp4Q9JHB3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Timp4Q9JHB3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Timp4Q9JHB3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Timp4Q9JHB3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.22■□□□□ 0.67
Timp4Q9JHB3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Timp4Q9JHB3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Timp4Q9JHB3 Gm5643-201ENSMUST00000117081 966 ntBASIC19.21■□□□□ 0.67
Timp4Q9JHB3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Timp4Q9JHB3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Timp4Q9JHB3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Timp4Q9JHB3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Timp4Q9JHB3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Timp4Q9JHB3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Timp4Q9JHB3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Timp4Q9JHB3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Timp4Q9JHB3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Timp4Q9JHB3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Timp4Q9JHB3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Timp4Q9JHB3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.2■□□□□ 0.66
Timp4Q9JHB3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Timp4Q9JHB3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.2■□□□□ 0.66
Timp4Q9JHB3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Timp4Q9JHB3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Timp4Q9JHB3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Timp4Q9JHB3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.2■□□□□ 0.66
Timp4Q9JHB3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Timp4Q9JHB3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Timp4Q9JHB3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Timp4Q9JHB3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.2■□□□□ 0.66
Timp4Q9JHB3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Timp4Q9JHB3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Timp4Q9JHB3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.19■□□□□ 0.66
Timp4Q9JHB3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Timp4Q9JHB3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Timp4Q9JHB3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Timp4Q9JHB3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Timp4Q9JHB3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Timp4Q9JHB3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.19■□□□□ 0.66
Timp4Q9JHB3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Timp4Q9JHB3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.19■□□□□ 0.66
Timp4Q9JHB3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Timp4Q9JHB3 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.19■□□□□ 0.66
Timp4Q9JHB3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Timp4Q9JHB3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Timp4Q9JHB3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Timp4Q9JHB3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Timp4Q9JHB3 Gm11927-201ENSMUST00000118472 759 ntBASIC19.18■□□□□ 0.66
Timp4Q9JHB3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Timp4Q9JHB3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Timp4Q9JHB3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
Timp4Q9JHB3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.18■□□□□ 0.66
Timp4Q9JHB3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Timp4Q9JHB3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.17■□□□□ 0.66
Timp4Q9JHB3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Timp4Q9JHB3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.17■□□□□ 0.66
Timp4Q9JHB3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.17■□□□□ 0.66
Timp4Q9JHB3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.17■□□□□ 0.66
Timp4Q9JHB3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Timp4Q9JHB3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Timp4Q9JHB3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Timp4Q9JHB3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Timp4Q9JHB3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.17■□□□□ 0.66
Timp4Q9JHB3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Timp4Q9JHB3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
Timp4Q9JHB3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Timp4Q9JHB3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Timp4Q9JHB3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Timp4Q9JHB3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Timp4Q9JHB3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.16■□□□□ 0.66
Timp4Q9JHB3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Timp4Q9JHB3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.16■□□□□ 0.66
Timp4Q9JHB3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.16■□□□□ 0.66
Timp4Q9JHB3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Timp4Q9JHB3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Timp4Q9JHB3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Timp4Q9JHB3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Timp4Q9JHB3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Timp4Q9JHB3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Timp4Q9JHB3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.15■□□□□ 0.66
Timp4Q9JHB3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Timp4Q9JHB3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Timp4Q9JHB3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
Timp4Q9JHB3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.15■□□□□ 0.66
Timp4Q9JHB3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms