Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps35Q9EQH3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps35Q9EQH3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps35Q9EQH3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps35Q9EQH3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps35Q9EQH3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.44■□□□□ 0.54
Vps35Q9EQH3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps35Q9EQH3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps35Q9EQH3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.44■□□□□ 0.54
Vps35Q9EQH3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Vps35Q9EQH3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps35Q9EQH3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vps35Q9EQH3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps35Q9EQH3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps35Q9EQH3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.44■□□□□ 0.54
Vps35Q9EQH3 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.44■□□□□ 0.54
Vps35Q9EQH3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps35Q9EQH3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps35Q9EQH3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps35Q9EQH3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Vps35Q9EQH3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps35Q9EQH3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps35Q9EQH3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps35Q9EQH3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps35Q9EQH3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps35Q9EQH3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vps35Q9EQH3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps35Q9EQH3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps35Q9EQH3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vps35Q9EQH3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vps35Q9EQH3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps35Q9EQH3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps35Q9EQH3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Vps35Q9EQH3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Vps35Q9EQH3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.43■□□□□ 0.54
Vps35Q9EQH3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vps35Q9EQH3 Gm12933-201ENSMUST00000120203 872 ntBASIC18.43■□□□□ 0.54
Vps35Q9EQH3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.43■□□□□ 0.54
Vps35Q9EQH3 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.43■□□□□ 0.54
Vps35Q9EQH3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps35Q9EQH3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps35Q9EQH3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps35Q9EQH3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps35Q9EQH3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps35Q9EQH3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Vps35Q9EQH3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Vps35Q9EQH3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps35Q9EQH3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps35Q9EQH3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.42■□□□□ 0.54
Vps35Q9EQH3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Vps35Q9EQH3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.42■□□□□ 0.54
Vps35Q9EQH3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Vps35Q9EQH3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Vps35Q9EQH3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps35Q9EQH3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps35Q9EQH3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.42■□□□□ 0.54
Vps35Q9EQH3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vps35Q9EQH3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps35Q9EQH3 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.41■□□□□ 0.54
Vps35Q9EQH3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps35Q9EQH3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps35Q9EQH3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps35Q9EQH3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Vps35Q9EQH3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps35Q9EQH3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps35Q9EQH3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps35Q9EQH3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vps35Q9EQH3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps35Q9EQH3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps35Q9EQH3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Vps35Q9EQH3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps35Q9EQH3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps35Q9EQH3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Vps35Q9EQH3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps35Q9EQH3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vps35Q9EQH3 Gm7290-201ENSMUST00000104990 617 ntBASIC18.4■□□□□ 0.54
Vps35Q9EQH3 Gm12918-201ENSMUST00000120234 636 ntBASIC18.4■□□□□ 0.54
Vps35Q9EQH3 Gm15710-201ENSMUST00000121821 636 ntBASIC18.4■□□□□ 0.54
Vps35Q9EQH3 Gm5075-201ENSMUST00000196916 622 ntBASIC18.4■□□□□ 0.54
Vps35Q9EQH3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vps35Q9EQH3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Vps35Q9EQH3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.4■□□□□ 0.54
Vps35Q9EQH3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.4■□□□□ 0.54
Vps35Q9EQH3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps35Q9EQH3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps35Q9EQH3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Vps35Q9EQH3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps35Q9EQH3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Vps35Q9EQH3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
Vps35Q9EQH3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps35Q9EQH3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vps35Q9EQH3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps35Q9EQH3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.39■□□□□ 0.53
Vps35Q9EQH3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps35Q9EQH3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.39■□□□□ 0.53
Vps35Q9EQH3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.39■□□□□ 0.53
Vps35Q9EQH3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps35Q9EQH3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps35Q9EQH3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps35Q9EQH3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms