Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ssmem1Q9D9Y8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ssmem1Q9D9Y8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Ssmem1Q9D9Y8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ssmem1Q9D9Y8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Ssmem1Q9D9Y8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Ssmem1Q9D9Y8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ssmem1Q9D9Y8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Ssmem1Q9D9Y8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ssmem1Q9D9Y8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.93■□□□□ 0.14
Ssmem1Q9D9Y8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ssmem1Q9D9Y8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ssmem1Q9D9Y8 Gm12441-201ENSMUST00000121806 588 ntBASIC15.93■□□□□ 0.14
Ssmem1Q9D9Y8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ssmem1Q9D9Y8 Rab3c-203ENSMUST00000224180 967 ntBASIC15.93■□□□□ 0.14
Ssmem1Q9D9Y8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ssmem1Q9D9Y8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ssmem1Q9D9Y8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Ssmem1Q9D9Y8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Ssmem1Q9D9Y8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ssmem1Q9D9Y8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ssmem1Q9D9Y8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ssmem1Q9D9Y8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ssmem1Q9D9Y8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ssmem1Q9D9Y8 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.93■□□□□ 0.14
Ssmem1Q9D9Y8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Ssmem1Q9D9Y8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ssmem1Q9D9Y8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ssmem1Q9D9Y8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ssmem1Q9D9Y8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.92■□□□□ 0.14
Ssmem1Q9D9Y8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ssmem1Q9D9Y8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ssmem1Q9D9Y8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ssmem1Q9D9Y8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.92■□□□□ 0.14
Ssmem1Q9D9Y8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.92■□□□□ 0.14
Ssmem1Q9D9Y8 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.92■□□□□ 0.14
Ssmem1Q9D9Y8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ssmem1Q9D9Y8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ssmem1Q9D9Y8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ssmem1Q9D9Y8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ssmem1Q9D9Y8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ssmem1Q9D9Y8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ssmem1Q9D9Y8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ssmem1Q9D9Y8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ssmem1Q9D9Y8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ssmem1Q9D9Y8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Ssmem1Q9D9Y8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ssmem1Q9D9Y8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ssmem1Q9D9Y8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Ssmem1Q9D9Y8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Ssmem1Q9D9Y8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ssmem1Q9D9Y8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ssmem1Q9D9Y8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ssmem1Q9D9Y8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ssmem1Q9D9Y8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ssmem1Q9D9Y8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ssmem1Q9D9Y8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ssmem1Q9D9Y8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.91■□□□□ 0.14
Ssmem1Q9D9Y8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ssmem1Q9D9Y8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ssmem1Q9D9Y8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ssmem1Q9D9Y8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ssmem1Q9D9Y8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ssmem1Q9D9Y8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ssmem1Q9D9Y8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ssmem1Q9D9Y8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Ssmem1Q9D9Y8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.9■□□□□ 0.14
Ssmem1Q9D9Y8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Ssmem1Q9D9Y8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.9■□□□□ 0.14
Ssmem1Q9D9Y8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.9■□□□□ 0.14
Ssmem1Q9D9Y8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ssmem1Q9D9Y8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ssmem1Q9D9Y8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Ssmem1Q9D9Y8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ssmem1Q9D9Y8 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.9■□□□□ 0.14
Ssmem1Q9D9Y8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Ssmem1Q9D9Y8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ssmem1Q9D9Y8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ssmem1Q9D9Y8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.89■□□□□ 0.13
Ssmem1Q9D9Y8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ssmem1Q9D9Y8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ssmem1Q9D9Y8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ssmem1Q9D9Y8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ssmem1Q9D9Y8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ssmem1Q9D9Y8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ssmem1Q9D9Y8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ssmem1Q9D9Y8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ssmem1Q9D9Y8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ssmem1Q9D9Y8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.89■□□□□ 0.13
Ssmem1Q9D9Y8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.89■□□□□ 0.13
Ssmem1Q9D9Y8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.89■□□□□ 0.13
Ssmem1Q9D9Y8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ssmem1Q9D9Y8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ssmem1Q9D9Y8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
Ssmem1Q9D9Y8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ssmem1Q9D9Y8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ssmem1Q9D9Y8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ssmem1Q9D9Y8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ssmem1Q9D9Y8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ssmem1Q9D9Y8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms