Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Rpap3Q9D706 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rpap3Q9D706 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rpap3Q9D706 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rpap3Q9D706 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rpap3Q9D706 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.37■□□□□ 0.85
Rpap3Q9D706 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rpap3Q9D706 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Rpap3Q9D706 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.37■□□□□ 0.85
Rpap3Q9D706 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Rpap3Q9D706 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.37■□□□□ 0.85
Rpap3Q9D706 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rpap3Q9D706 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rpap3Q9D706 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Rpap3Q9D706 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rpap3Q9D706 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rpap3Q9D706 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rpap3Q9D706 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rpap3Q9D706 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rpap3Q9D706 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rpap3Q9D706 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Rpap3Q9D706 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rpap3Q9D706 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.36■□□□□ 0.85
Rpap3Q9D706 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rpap3Q9D706 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rpap3Q9D706 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.36■□□□□ 0.85
Rpap3Q9D706 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rpap3Q9D706 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Rpap3Q9D706 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpap3Q9D706 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Rpap3Q9D706 Gm10252-201ENSMUST00000209541 832 ntBASIC20.35■□□□□ 0.85
Rpap3Q9D706 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpap3Q9D706 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpap3Q9D706 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpap3Q9D706 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.35■□□□□ 0.85
Rpap3Q9D706 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.35■□□□□ 0.85
Rpap3Q9D706 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rpap3Q9D706 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rpap3Q9D706 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rpap3Q9D706 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.34■□□□□ 0.85
Rpap3Q9D706 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.34■□□□□ 0.85
Rpap3Q9D706 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpap3Q9D706 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpap3Q9D706 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Rpap3Q9D706 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpap3Q9D706 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpap3Q9D706 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpap3Q9D706 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpap3Q9D706 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.34■□□□□ 0.85
Rpap3Q9D706 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rpap3Q9D706 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rpap3Q9D706 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rpap3Q9D706 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Rpap3Q9D706 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.33■□□□□ 0.85
Rpap3Q9D706 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Rpap3Q9D706 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.33■□□□□ 0.84
Rpap3Q9D706 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Rpap3Q9D706 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rpap3Q9D706 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rpap3Q9D706 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rpap3Q9D706 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rpap3Q9D706 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Rpap3Q9D706 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Rpap3Q9D706 Zfp783-201ENSMUST00000095946 670 ntBASIC20.32■□□□□ 0.84
Rpap3Q9D706 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Rpap3Q9D706 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.32■□□□□ 0.84
Rpap3Q9D706 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rpap3Q9D706 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rpap3Q9D706 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rpap3Q9D706 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rpap3Q9D706 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpap3Q9D706 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.31■□□□□ 0.84
Rpap3Q9D706 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpap3Q9D706 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.31■□□□□ 0.84
Rpap3Q9D706 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rpap3Q9D706 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpap3Q9D706 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpap3Q9D706 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Rpap3Q9D706 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.31■□□□□ 0.84
Rpap3Q9D706 Gm10698-201ENSMUST00000182663 604 ntBASIC20.31■□□□□ 0.84
Rpap3Q9D706 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.31■□□□□ 0.84
Rpap3Q9D706 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.31■□□□□ 0.84
Rpap3Q9D706 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpap3Q9D706 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpap3Q9D706 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rpap3Q9D706 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Rpap3Q9D706 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rpap3Q9D706 Gm15378-201ENSMUST00000121894 207 ntBASIC20.3■□□□□ 0.84
Rpap3Q9D706 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.3■□□□□ 0.84
Rpap3Q9D706 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rpap3Q9D706 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rpap3Q9D706 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rpap3Q9D706 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpap3Q9D706 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rpap3Q9D706 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpap3Q9D706 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rpap3Q9D706 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.29■□□□□ 0.84
Rpap3Q9D706 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.29■□□□□ 0.84
Rpap3Q9D706 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.29■□□□□ 0.84
Rpap3Q9D706 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms