Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tube1Q9D6T1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.55■□□□□ 0.88
Tube1Q9D6T1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tube1Q9D6T1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tube1Q9D6T1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tube1Q9D6T1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tube1Q9D6T1 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.55■□□□□ 0.88
Tube1Q9D6T1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tube1Q9D6T1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tube1Q9D6T1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tube1Q9D6T1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Tube1Q9D6T1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tube1Q9D6T1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Tube1Q9D6T1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Tube1Q9D6T1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tube1Q9D6T1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tube1Q9D6T1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tube1Q9D6T1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.54■□□□□ 0.88
Tube1Q9D6T1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tube1Q9D6T1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tube1Q9D6T1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tube1Q9D6T1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tube1Q9D6T1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tube1Q9D6T1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tube1Q9D6T1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tube1Q9D6T1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tube1Q9D6T1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tube1Q9D6T1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tube1Q9D6T1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tube1Q9D6T1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.53■□□□□ 0.88
Tube1Q9D6T1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.53■□□□□ 0.88
Tube1Q9D6T1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tube1Q9D6T1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tube1Q9D6T1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.53■□□□□ 0.88
Tube1Q9D6T1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Tube1Q9D6T1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.53■□□□□ 0.88
Tube1Q9D6T1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tube1Q9D6T1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tube1Q9D6T1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tube1Q9D6T1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Tube1Q9D6T1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tube1Q9D6T1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tube1Q9D6T1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tube1Q9D6T1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tube1Q9D6T1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tube1Q9D6T1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Tube1Q9D6T1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Tube1Q9D6T1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.52■□□□□ 0.88
Tube1Q9D6T1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tube1Q9D6T1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tube1Q9D6T1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Tube1Q9D6T1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tube1Q9D6T1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tube1Q9D6T1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Tube1Q9D6T1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.52■□□□□ 0.87
Tube1Q9D6T1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tube1Q9D6T1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tube1Q9D6T1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tube1Q9D6T1 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.51■□□□□ 0.87
Tube1Q9D6T1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tube1Q9D6T1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tube1Q9D6T1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tube1Q9D6T1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Tube1Q9D6T1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Tube1Q9D6T1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tube1Q9D6T1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tube1Q9D6T1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tube1Q9D6T1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Tube1Q9D6T1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Tube1Q9D6T1 Gm12527-201ENSMUST00000117967 564 ntBASIC20.5■□□□□ 0.87
Tube1Q9D6T1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.5■□□□□ 0.87
Tube1Q9D6T1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tube1Q9D6T1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tube1Q9D6T1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Tube1Q9D6T1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tube1Q9D6T1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tube1Q9D6T1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tube1Q9D6T1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tube1Q9D6T1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.49■□□□□ 0.87
Tube1Q9D6T1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tube1Q9D6T1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tube1Q9D6T1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tube1Q9D6T1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tube1Q9D6T1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Tube1Q9D6T1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tube1Q9D6T1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tube1Q9D6T1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Tube1Q9D6T1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.49■□□□□ 0.87
Tube1Q9D6T1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tube1Q9D6T1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Tube1Q9D6T1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Tube1Q9D6T1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Tube1Q9D6T1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.48■□□□□ 0.87
Tube1Q9D6T1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.48■□□□□ 0.87
Tube1Q9D6T1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Tube1Q9D6T1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tube1Q9D6T1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tube1Q9D6T1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tube1Q9D6T1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Tube1Q9D6T1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms