Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chaf1bQ9D0N7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chaf1bQ9D0N7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chaf1bQ9D0N7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Chaf1bQ9D0N7 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.35■□□□□ 0.37
Chaf1bQ9D0N7 Gm14117-201ENSMUST00000122417 843 ntBASIC17.35■□□□□ 0.37
Chaf1bQ9D0N7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.35■□□□□ 0.37
Chaf1bQ9D0N7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chaf1bQ9D0N7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chaf1bQ9D0N7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chaf1bQ9D0N7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chaf1bQ9D0N7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chaf1bQ9D0N7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.34■□□□□ 0.37
Chaf1bQ9D0N7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1bQ9D0N7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.34■□□□□ 0.37
Chaf1bQ9D0N7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1bQ9D0N7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Chaf1bQ9D0N7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1bQ9D0N7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1bQ9D0N7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Chaf1bQ9D0N7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.34■□□□□ 0.37
Chaf1bQ9D0N7 Golgb1-201ENSMUST00000023534 498 ntBASIC17.34■□□□□ 0.37
Chaf1bQ9D0N7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1bQ9D0N7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1bQ9D0N7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1bQ9D0N7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1bQ9D0N7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.34■□□□□ 0.37
Chaf1bQ9D0N7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1bQ9D0N7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Chaf1bQ9D0N7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Chaf1bQ9D0N7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chaf1bQ9D0N7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chaf1bQ9D0N7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chaf1bQ9D0N7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chaf1bQ9D0N7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chaf1bQ9D0N7 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.33■□□□□ 0.36
Chaf1bQ9D0N7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chaf1bQ9D0N7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chaf1bQ9D0N7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chaf1bQ9D0N7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chaf1bQ9D0N7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chaf1bQ9D0N7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chaf1bQ9D0N7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Chaf1bQ9D0N7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chaf1bQ9D0N7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chaf1bQ9D0N7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chaf1bQ9D0N7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.32■□□□□ 0.36
Chaf1bQ9D0N7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chaf1bQ9D0N7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Chaf1bQ9D0N7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chaf1bQ9D0N7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chaf1bQ9D0N7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.32■□□□□ 0.36
Chaf1bQ9D0N7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chaf1bQ9D0N7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chaf1bQ9D0N7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chaf1bQ9D0N7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chaf1bQ9D0N7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chaf1bQ9D0N7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chaf1bQ9D0N7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chaf1bQ9D0N7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Chaf1bQ9D0N7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chaf1bQ9D0N7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chaf1bQ9D0N7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chaf1bQ9D0N7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chaf1bQ9D0N7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chaf1bQ9D0N7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chaf1bQ9D0N7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chaf1bQ9D0N7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Chaf1bQ9D0N7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.31■□□□□ 0.36
Chaf1bQ9D0N7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chaf1bQ9D0N7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chaf1bQ9D0N7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chaf1bQ9D0N7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chaf1bQ9D0N7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chaf1bQ9D0N7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chaf1bQ9D0N7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chaf1bQ9D0N7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chaf1bQ9D0N7 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.31■□□□□ 0.36
Chaf1bQ9D0N7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chaf1bQ9D0N7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chaf1bQ9D0N7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Chaf1bQ9D0N7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chaf1bQ9D0N7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.3■□□□□ 0.36
Chaf1bQ9D0N7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chaf1bQ9D0N7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chaf1bQ9D0N7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chaf1bQ9D0N7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Chaf1bQ9D0N7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.3■□□□□ 0.36
Chaf1bQ9D0N7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chaf1bQ9D0N7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chaf1bQ9D0N7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chaf1bQ9D0N7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chaf1bQ9D0N7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Chaf1bQ9D0N7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chaf1bQ9D0N7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chaf1bQ9D0N7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.29■□□□□ 0.36
Chaf1bQ9D0N7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chaf1bQ9D0N7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chaf1bQ9D0N7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chaf1bQ9D0N7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms