Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Msantd3Q9CR78 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Msantd3Q9CR78 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Msantd3Q9CR78 Gm2399-201ENSMUST00000104944 225 ntBASIC17.69■□□□□ 0.42
Msantd3Q9CR78 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Msantd3Q9CR78 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Msantd3Q9CR78 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Msantd3Q9CR78 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Msantd3Q9CR78 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Msantd3Q9CR78 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Msantd3Q9CR78 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Msantd3Q9CR78 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Msantd3Q9CR78 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msantd3Q9CR78 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msantd3Q9CR78 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msantd3Q9CR78 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msantd3Q9CR78 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msantd3Q9CR78 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msantd3Q9CR78 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Msantd3Q9CR78 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msantd3Q9CR78 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.68■□□□□ 0.42
Msantd3Q9CR78 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.68■□□□□ 0.42
Msantd3Q9CR78 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.68■□□□□ 0.42
Msantd3Q9CR78 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.68■□□□□ 0.42
Msantd3Q9CR78 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.68■□□□□ 0.42
Msantd3Q9CR78 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.68■□□□□ 0.42
Msantd3Q9CR78 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.68■□□□□ 0.42
Msantd3Q9CR78 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.67■□□□□ 0.42
Msantd3Q9CR78 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.67■□□□□ 0.42
Msantd3Q9CR78 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msantd3Q9CR78 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.67■□□□□ 0.42
Msantd3Q9CR78 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Msantd3Q9CR78 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msantd3Q9CR78 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Msantd3Q9CR78 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.67■□□□□ 0.42
Msantd3Q9CR78 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msantd3Q9CR78 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msantd3Q9CR78 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msantd3Q9CR78 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Msantd3Q9CR78 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Msantd3Q9CR78 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msantd3Q9CR78 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msantd3Q9CR78 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Msantd3Q9CR78 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msantd3Q9CR78 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msantd3Q9CR78 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Msantd3Q9CR78 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msantd3Q9CR78 Mir1199-201ENSMUST00000117015 119 ntBASIC17.66■□□□□ 0.42
Msantd3Q9CR78 Gm10698-201ENSMUST00000182663 604 ntBASIC17.66■□□□□ 0.42
Msantd3Q9CR78 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.66■□□□□ 0.42
Msantd3Q9CR78 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.66■□□□□ 0.42
Msantd3Q9CR78 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msantd3Q9CR78 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Msantd3Q9CR78 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msantd3Q9CR78 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msantd3Q9CR78 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msantd3Q9CR78 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Msantd3Q9CR78 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Msantd3Q9CR78 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Msantd3Q9CR78 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Msantd3Q9CR78 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msantd3Q9CR78 Flg-201ENSMUST00000050758 1488 ntBASIC17.65■□□□□ 0.42
Msantd3Q9CR78 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msantd3Q9CR78 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msantd3Q9CR78 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msantd3Q9CR78 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Msantd3Q9CR78 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.65■□□□□ 0.42
Msantd3Q9CR78 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Msantd3Q9CR78 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.65■□□□□ 0.42
Msantd3Q9CR78 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Msantd3Q9CR78 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msantd3Q9CR78 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msantd3Q9CR78 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Msantd3Q9CR78 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.65■□□□□ 0.42
Msantd3Q9CR78 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msantd3Q9CR78 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Msantd3Q9CR78 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msantd3Q9CR78 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.65■□□□□ 0.42
Msantd3Q9CR78 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msantd3Q9CR78 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msantd3Q9CR78 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msantd3Q9CR78 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Msantd3Q9CR78 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msantd3Q9CR78 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.64■□□□□ 0.41
Msantd3Q9CR78 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Msantd3Q9CR78 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Msantd3Q9CR78 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.64■□□□□ 0.41
Msantd3Q9CR78 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msantd3Q9CR78 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msantd3Q9CR78 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msantd3Q9CR78 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msantd3Q9CR78 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msantd3Q9CR78 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msantd3Q9CR78 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Msantd3Q9CR78 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Msantd3Q9CR78 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msantd3Q9CR78 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Msantd3Q9CR78 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msantd3Q9CR78 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msantd3Q9CR78 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms