Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim11Q99PQ2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim11Q99PQ2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim11Q99PQ2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim11Q99PQ2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim11Q99PQ2 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.03■□□□□ 0.96
Trim11Q99PQ2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim11Q99PQ2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim11Q99PQ2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim11Q99PQ2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim11Q99PQ2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Trim11Q99PQ2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
Trim11Q99PQ2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim11Q99PQ2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.03■□□□□ 0.96
Trim11Q99PQ2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim11Q99PQ2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim11Q99PQ2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.03■□□□□ 0.96
Trim11Q99PQ2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim11Q99PQ2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim11Q99PQ2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.03■□□□□ 0.96
Trim11Q99PQ2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim11Q99PQ2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim11Q99PQ2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim11Q99PQ2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim11Q99PQ2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim11Q99PQ2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim11Q99PQ2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim11Q99PQ2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim11Q99PQ2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim11Q99PQ2 Gm10493-201ENSMUST00000097270 612 ntBASIC21.02■□□□□ 0.96
Trim11Q99PQ2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.02■□□□□ 0.96
Trim11Q99PQ2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Trim11Q99PQ2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trim11Q99PQ2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
Trim11Q99PQ2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Trim11Q99PQ2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trim11Q99PQ2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim11Q99PQ2 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.01■□□□□ 0.95
Trim11Q99PQ2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim11Q99PQ2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Trim11Q99PQ2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim11Q99PQ2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim11Q99PQ2 Gm42778-201ENSMUST00000199644 553 ntBASIC21.01■□□□□ 0.95
Trim11Q99PQ2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim11Q99PQ2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim11Q99PQ2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Trim11Q99PQ2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.01■□□□□ 0.95
Trim11Q99PQ2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.01■□□□□ 0.95
Trim11Q99PQ2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim11Q99PQ2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim11Q99PQ2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim11Q99PQ2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim11Q99PQ2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim11Q99PQ2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim11Q99PQ2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim11Q99PQ2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim11Q99PQ2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim11Q99PQ2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Trim11Q99PQ2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim11Q99PQ2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim11Q99PQ2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21■□□□□ 0.95
Trim11Q99PQ2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim11Q99PQ2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim11Q99PQ2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Trim11Q99PQ2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim11Q99PQ2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim11Q99PQ2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim11Q99PQ2 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.99■□□□□ 0.95
Trim11Q99PQ2 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.99■□□□□ 0.95
Trim11Q99PQ2 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.99■□□□□ 0.95
Trim11Q99PQ2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim11Q99PQ2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim11Q99PQ2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim11Q99PQ2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim11Q99PQ2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim11Q99PQ2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim11Q99PQ2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Trim11Q99PQ2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim11Q99PQ2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim11Q99PQ2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim11Q99PQ2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim11Q99PQ2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim11Q99PQ2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim11Q99PQ2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim11Q99PQ2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim11Q99PQ2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim11Q99PQ2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim11Q99PQ2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim11Q99PQ2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim11Q99PQ2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim11Q99PQ2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim11Q99PQ2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim11Q99PQ2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim11Q99PQ2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim11Q99PQ2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim11Q99PQ2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim11Q99PQ2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim11Q99PQ2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim11Q99PQ2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim11Q99PQ2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms