Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh15Q99PJ1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pcdh15Q99PJ1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh15Q99PJ1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pcdh15Q99PJ1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh15Q99PJ1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh15Q99PJ1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh15Q99PJ1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh15Q99PJ1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh15Q99PJ1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh15Q99PJ1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh15Q99PJ1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh15Q99PJ1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Pcdh15Q99PJ1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC21.22■□□□□ 0.99
Pcdh15Q99PJ1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh15Q99PJ1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.22■□□□□ 0.99
Pcdh15Q99PJ1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh15Q99PJ1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh15Q99PJ1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Pcdh15Q99PJ1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh15Q99PJ1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh15Q99PJ1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh15Q99PJ1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC21.21■□□□□ 0.99
Pcdh15Q99PJ1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.21■□□□□ 0.99
Pcdh15Q99PJ1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh15Q99PJ1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Pcdh15Q99PJ1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
Pcdh15Q99PJ1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Pcdh15Q99PJ1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh15Q99PJ1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Pcdh15Q99PJ1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Pcdh15Q99PJ1 Gm12085-201ENSMUST00000119263 940 ntBASIC21.2■□□□□ 0.98
Pcdh15Q99PJ1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh15Q99PJ1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh15Q99PJ1 AC159205.3-201ENSMUST00000224614 874 ntBASIC21.2■□□□□ 0.98
Pcdh15Q99PJ1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh15Q99PJ1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Pcdh15Q99PJ1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
Pcdh15Q99PJ1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh15Q99PJ1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh15Q99PJ1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh15Q99PJ1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Pcdh15Q99PJ1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh15Q99PJ1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.19■□□□□ 0.98
Pcdh15Q99PJ1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh15Q99PJ1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Pcdh15Q99PJ1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Pcdh15Q99PJ1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh15Q99PJ1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh15Q99PJ1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh15Q99PJ1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh15Q99PJ1 AC134329.2-201ENSMUST00000217897 428 ntBASIC21.18■□□□□ 0.98
Pcdh15Q99PJ1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh15Q99PJ1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh15Q99PJ1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh15Q99PJ1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh15Q99PJ1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh15Q99PJ1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.17■□□□□ 0.98
Pcdh15Q99PJ1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC21.17■□□□□ 0.98
Pcdh15Q99PJ1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh15Q99PJ1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh15Q99PJ1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh15Q99PJ1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh15Q99PJ1 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.17■□□□□ 0.98
Pcdh15Q99PJ1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh15Q99PJ1 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.17■□□□□ 0.98
Pcdh15Q99PJ1 Gm7284-201ENSMUST00000131667 944 ntBASIC21.17■□□□□ 0.98
Pcdh15Q99PJ1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh15Q99PJ1 Gm43353-201ENSMUST00000199224 1295 ntBASIC21.17■□□□□ 0.98
Pcdh15Q99PJ1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh15Q99PJ1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh15Q99PJ1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh15Q99PJ1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh15Q99PJ1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh15Q99PJ1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
Pcdh15Q99PJ1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Pcdh15Q99PJ1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcdh15Q99PJ1 AC166341.7-201ENSMUST00000221698 126 ntBASIC21.16■□□□□ 0.98
Pcdh15Q99PJ1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh15Q99PJ1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh15Q99PJ1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Pcdh15Q99PJ1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh15Q99PJ1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh15Q99PJ1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Pcdh15Q99PJ1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh15Q99PJ1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh15Q99PJ1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh15Q99PJ1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh15Q99PJ1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh15Q99PJ1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh15Q99PJ1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Pcdh15Q99PJ1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdh15Q99PJ1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdh15Q99PJ1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdh15Q99PJ1 Gm18101-201ENSMUST00000215769 548 ntBASIC21.14■□□□□ 0.97
Pcdh15Q99PJ1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh15Q99PJ1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh15Q99PJ1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh15Q99PJ1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh15Q99PJ1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms