Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gtf2ird2Q99NI3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Gtf2ird2Q99NI3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gtf2ird2Q99NI3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gtf2ird2Q99NI3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gtf2ird2Q99NI3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gtf2ird2Q99NI3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Gtf2ird2Q99NI3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gtf2ird2Q99NI3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.94■□□□□ 0.62
Gtf2ird2Q99NI3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gtf2ird2Q99NI3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.94■□□□□ 0.62
Gtf2ird2Q99NI3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gtf2ird2Q99NI3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gtf2ird2Q99NI3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf2ird2Q99NI3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf2ird2Q99NI3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Gtf2ird2Q99NI3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf2ird2Q99NI3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf2ird2Q99NI3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf2ird2Q99NI3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.93■□□□□ 0.62
Gtf2ird2Q99NI3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.93■□□□□ 0.62
Gtf2ird2Q99NI3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.93■□□□□ 0.62
Gtf2ird2Q99NI3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf2ird2Q99NI3 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.93■□□□□ 0.62
Gtf2ird2Q99NI3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.93■□□□□ 0.62
Gtf2ird2Q99NI3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.93■□□□□ 0.62
Gtf2ird2Q99NI3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf2ird2Q99NI3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf2ird2Q99NI3 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.92■□□□□ 0.62
Gtf2ird2Q99NI3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf2ird2Q99NI3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf2ird2Q99NI3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf2ird2Q99NI3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf2ird2Q99NI3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf2ird2Q99NI3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf2ird2Q99NI3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf2ird2Q99NI3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.92■□□□□ 0.62
Gtf2ird2Q99NI3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf2ird2Q99NI3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Gtf2ird2Q99NI3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf2ird2Q99NI3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Gtf2ird2Q99NI3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf2ird2Q99NI3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.92■□□□□ 0.62
Gtf2ird2Q99NI3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Gtf2ird2Q99NI3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf2ird2Q99NI3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf2ird2Q99NI3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.91■□□□□ 0.62
Gtf2ird2Q99NI3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf2ird2Q99NI3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Gtf2ird2Q99NI3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf2ird2Q99NI3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf2ird2Q99NI3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Gtf2ird2Q99NI3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf2ird2Q99NI3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.91■□□□□ 0.62
Gtf2ird2Q99NI3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf2ird2Q99NI3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf2ird2Q99NI3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf2ird2Q99NI3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Gtf2ird2Q99NI3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.9■□□□□ 0.62
Gtf2ird2Q99NI3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.9■□□□□ 0.62
Gtf2ird2Q99NI3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.9■□□□□ 0.62
Gtf2ird2Q99NI3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf2ird2Q99NI3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf2ird2Q99NI3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf2ird2Q99NI3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf2ird2Q99NI3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf2ird2Q99NI3 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.9■□□□□ 0.62
Gtf2ird2Q99NI3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf2ird2Q99NI3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Gtf2ird2Q99NI3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.89■□□□□ 0.62
Gtf2ird2Q99NI3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf2ird2Q99NI3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf2ird2Q99NI3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf2ird2Q99NI3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf2ird2Q99NI3 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.89■□□□□ 0.61
Gtf2ird2Q99NI3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.89■□□□□ 0.61
Gtf2ird2Q99NI3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf2ird2Q99NI3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Gtf2ird2Q99NI3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf2ird2Q99NI3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf2ird2Q99NI3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Gtf2ird2Q99NI3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf2ird2Q99NI3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf2ird2Q99NI3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf2ird2Q99NI3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.89■□□□□ 0.61
Gtf2ird2Q99NI3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf2ird2Q99NI3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf2ird2Q99NI3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Gtf2ird2Q99NI3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gtf2ird2Q99NI3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gtf2ird2Q99NI3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gtf2ird2Q99NI3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.88■□□□□ 0.61
Gtf2ird2Q99NI3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gtf2ird2Q99NI3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.88■□□□□ 0.61
Gtf2ird2Q99NI3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gtf2ird2Q99NI3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.88■□□□□ 0.61
Gtf2ird2Q99NI3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gtf2ird2Q99NI3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gtf2ird2Q99NI3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gtf2ird2Q99NI3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms