Protein–RNA interactions for Protein: Q99JY4

Trabd, TraB domain-containing protein, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TrabdQ99JY4 Gm2399-201ENSMUST00000104944 225 ntBASIC19.21■□□□□ 0.67
TrabdQ99JY4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TrabdQ99JY4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TrabdQ99JY4 Gm27275-201ENSMUST00000184318 272 ntBASIC19.21■□□□□ 0.67
TrabdQ99JY4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.21■□□□□ 0.67
TrabdQ99JY4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TrabdQ99JY4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TrabdQ99JY4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TrabdQ99JY4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TrabdQ99JY4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TrabdQ99JY4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.2■□□□□ 0.66
TrabdQ99JY4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TrabdQ99JY4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TrabdQ99JY4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TrabdQ99JY4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
TrabdQ99JY4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TrabdQ99JY4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TrabdQ99JY4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TrabdQ99JY4 Gm22325-201ENSMUST00000158904 308 ntBASIC19.2■□□□□ 0.66
TrabdQ99JY4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.2■□□□□ 0.66
TrabdQ99JY4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TrabdQ99JY4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TrabdQ99JY4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TrabdQ99JY4 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.2■□□□□ 0.66
TrabdQ99JY4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
TrabdQ99JY4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TrabdQ99JY4 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.2■□□□□ 0.66
TrabdQ99JY4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TrabdQ99JY4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TrabdQ99JY4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TrabdQ99JY4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TrabdQ99JY4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TrabdQ99JY4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TrabdQ99JY4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TrabdQ99JY4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TrabdQ99JY4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TrabdQ99JY4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.19■□□□□ 0.66
TrabdQ99JY4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TrabdQ99JY4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TrabdQ99JY4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TrabdQ99JY4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TrabdQ99JY4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TrabdQ99JY4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TrabdQ99JY4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
TrabdQ99JY4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TrabdQ99JY4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TrabdQ99JY4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TrabdQ99JY4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TrabdQ99JY4 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.18■□□□□ 0.66
TrabdQ99JY4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TrabdQ99JY4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TrabdQ99JY4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TrabdQ99JY4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TrabdQ99JY4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TrabdQ99JY4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TrabdQ99JY4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TrabdQ99JY4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TrabdQ99JY4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TrabdQ99JY4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TrabdQ99JY4 Flg-201ENSMUST00000050758 1488 ntBASIC19.17■□□□□ 0.66
TrabdQ99JY4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.17■□□□□ 0.66
TrabdQ99JY4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TrabdQ99JY4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.17■□□□□ 0.66
TrabdQ99JY4 Gm10812-201ENSMUST00000099864 546 ntBASIC19.17■□□□□ 0.66
TrabdQ99JY4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TrabdQ99JY4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TrabdQ99JY4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TrabdQ99JY4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TrabdQ99JY4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TrabdQ99JY4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.16■□□□□ 0.66
TrabdQ99JY4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TrabdQ99JY4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TrabdQ99JY4 Gm18666-201ENSMUST00000190039 958 ntBASIC19.16■□□□□ 0.66
TrabdQ99JY4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TrabdQ99JY4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TrabdQ99JY4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TrabdQ99JY4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TrabdQ99JY4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TrabdQ99JY4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TrabdQ99JY4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.15■□□□□ 0.66
TrabdQ99JY4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TrabdQ99JY4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TrabdQ99JY4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TrabdQ99JY4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TrabdQ99JY4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TrabdQ99JY4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TrabdQ99JY4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TrabdQ99JY4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TrabdQ99JY4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TrabdQ99JY4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TrabdQ99JY4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TrabdQ99JY4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.14■□□□□ 0.65
TrabdQ99JY4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.14■□□□□ 0.65
TrabdQ99JY4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.14■□□□□ 0.65
TrabdQ99JY4 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.14■□□□□ 0.65
TrabdQ99JY4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
TrabdQ99JY4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.14■□□□□ 0.65
TrabdQ99JY4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TrabdQ99JY4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.14■□□□□ 0.65
TrabdQ99JY4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms