Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb4Q91XX6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.53■□□□□ 0.72
Pcdhgb4Q91XX6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.53■□□□□ 0.72
Pcdhgb4Q91XX6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb4Q91XX6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.53■□□□□ 0.72
Pcdhgb4Q91XX6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb4Q91XX6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgb4Q91XX6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgb4Q91XX6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgb4Q91XX6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgb4Q91XX6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
Pcdhgb4Q91XX6 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.52■□□□□ 0.72
Pcdhgb4Q91XX6 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.52■□□□□ 0.72
Pcdhgb4Q91XX6 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.52■□□□□ 0.72
Pcdhgb4Q91XX6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.52■□□□□ 0.72
Pcdhgb4Q91XX6 Gm10493-201ENSMUST00000097270 612 ntBASIC19.52■□□□□ 0.72
Pcdhgb4Q91XX6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgb4Q91XX6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgb4Q91XX6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Pcdhgb4Q91XX6 Rarb-207ENSMUST00000225921 2756 ntBASIC19.52■□□□□ 0.72
Pcdhgb4Q91XX6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Pcdhgb4Q91XX6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdhgb4Q91XX6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb4Q91XX6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb4Q91XX6 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb4Q91XX6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdhgb4Q91XX6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb4Q91XX6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb4Q91XX6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Pcdhgb4Q91XX6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb4Q91XX6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Pcdhgb4Q91XX6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.51■□□□□ 0.71
Pcdhgb4Q91XX6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb4Q91XX6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb4Q91XX6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb4Q91XX6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb4Q91XX6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgb4Q91XX6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.5■□□□□ 0.71
Pcdhgb4Q91XX6 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.5■□□□□ 0.71
Pcdhgb4Q91XX6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Pcdhgb4Q91XX6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgb4Q91XX6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Pcdhgb4Q91XX6 Gm42778-201ENSMUST00000199644 553 ntBASIC19.5■□□□□ 0.71
Pcdhgb4Q91XX6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgb4Q91XX6 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgb4Q91XX6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgb4Q91XX6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb4Q91XX6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb4Q91XX6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb4Q91XX6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Pcdhgb4Q91XX6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb4Q91XX6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.49■□□□□ 0.71
Pcdhgb4Q91XX6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb4Q91XX6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.49■□□□□ 0.71
Pcdhgb4Q91XX6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.49■□□□□ 0.71
Pcdhgb4Q91XX6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.49■□□□□ 0.71
Pcdhgb4Q91XX6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb4Q91XX6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Pcdhgb4Q91XX6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb4Q91XX6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb4Q91XX6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.49■□□□□ 0.71
Pcdhgb4Q91XX6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.49■□□□□ 0.71
Pcdhgb4Q91XX6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb4Q91XX6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb4Q91XX6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb4Q91XX6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Pcdhgb4Q91XX6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb4Q91XX6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Pcdhgb4Q91XX6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb4Q91XX6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.48■□□□□ 0.71
Pcdhgb4Q91XX6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb4Q91XX6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb4Q91XX6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.48■□□□□ 0.71
Pcdhgb4Q91XX6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Pcdhgb4Q91XX6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb4Q91XX6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb4Q91XX6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb4Q91XX6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgb4Q91XX6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.47■□□□□ 0.71
Pcdhgb4Q91XX6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgb4Q91XX6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Pcdhgb4Q91XX6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgb4Q91XX6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgb4Q91XX6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.47■□□□□ 0.71
Pcdhgb4Q91XX6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgb4Q91XX6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pcdhgb4Q91XX6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgb4Q91XX6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgb4Q91XX6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb4Q91XX6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb4Q91XX6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb4Q91XX6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Pcdhgb4Q91XX6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb4Q91XX6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb4Q91XX6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb4Q91XX6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Pcdhgb4Q91XX6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb4Q91XX6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb4Q91XX6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhgb4Q91XX6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms