Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vsx1Q91V10 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.28■□□□□ 0.52
Vsx1Q91V10 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.28■□□□□ 0.52
Vsx1Q91V10 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vsx1Q91V10 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vsx1Q91V10 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vsx1Q91V10 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vsx1Q91V10 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vsx1Q91V10 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vsx1Q91V10 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vsx1Q91V10 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vsx1Q91V10 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vsx1Q91V10 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.27■□□□□ 0.52
Vsx1Q91V10 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vsx1Q91V10 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.27■□□□□ 0.52
Vsx1Q91V10 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.27■□□□□ 0.52
Vsx1Q91V10 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vsx1Q91V10 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vsx1Q91V10 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Vsx1Q91V10 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vsx1Q91V10 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Vsx1Q91V10 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Vsx1Q91V10 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vsx1Q91V10 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vsx1Q91V10 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vsx1Q91V10 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vsx1Q91V10 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Vsx1Q91V10 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vsx1Q91V10 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Vsx1Q91V10 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vsx1Q91V10 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vsx1Q91V10 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vsx1Q91V10 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vsx1Q91V10 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vsx1Q91V10 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vsx1Q91V10 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vsx1Q91V10 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vsx1Q91V10 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vsx1Q91V10 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.25■□□□□ 0.51
Vsx1Q91V10 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vsx1Q91V10 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Vsx1Q91V10 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vsx1Q91V10 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.25■□□□□ 0.51
Vsx1Q91V10 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Vsx1Q91V10 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vsx1Q91V10 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vsx1Q91V10 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Vsx1Q91V10 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vsx1Q91V10 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.25■□□□□ 0.51
Vsx1Q91V10 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vsx1Q91V10 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vsx1Q91V10 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vsx1Q91V10 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vsx1Q91V10 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vsx1Q91V10 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vsx1Q91V10 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vsx1Q91V10 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.24■□□□□ 0.51
Vsx1Q91V10 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vsx1Q91V10 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.24■□□□□ 0.51
Vsx1Q91V10 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.24■□□□□ 0.51
Vsx1Q91V10 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vsx1Q91V10 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.23■□□□□ 0.51
Vsx1Q91V10 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.23■□□□□ 0.51
Vsx1Q91V10 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.23■□□□□ 0.51
Vsx1Q91V10 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vsx1Q91V10 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vsx1Q91V10 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Vsx1Q91V10 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vsx1Q91V10 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vsx1Q91V10 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Vsx1Q91V10 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vsx1Q91V10 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.23■□□□□ 0.51
Vsx1Q91V10 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vsx1Q91V10 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.23■□□□□ 0.51
Vsx1Q91V10 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vsx1Q91V10 Gm7367-201ENSMUST00000057611 492 ntBASIC18.23■□□□□ 0.51
Vsx1Q91V10 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.23■□□□□ 0.51
Vsx1Q91V10 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Vsx1Q91V10 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.23■□□□□ 0.51
Vsx1Q91V10 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vsx1Q91V10 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vsx1Q91V10 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vsx1Q91V10 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vsx1Q91V10 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vsx1Q91V10 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.22■□□□□ 0.51
Vsx1Q91V10 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Vsx1Q91V10 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vsx1Q91V10 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vsx1Q91V10 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vsx1Q91V10 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vsx1Q91V10 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vsx1Q91V10 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vsx1Q91V10 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vsx1Q91V10 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Vsx1Q91V10 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vsx1Q91V10 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vsx1Q91V10 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vsx1Q91V10 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vsx1Q91V10 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vsx1Q91V10 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms