Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Cspg4Q8VHY0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cspg4Q8VHY0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.93■□□□□ 0.14
Cspg4Q8VHY0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cspg4Q8VHY0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cspg4Q8VHY0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cspg4Q8VHY0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cspg4Q8VHY0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Cspg4Q8VHY0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Cspg4Q8VHY0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cspg4Q8VHY0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cspg4Q8VHY0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cspg4Q8VHY0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cspg4Q8VHY0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cspg4Q8VHY0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.91■□□□□ 0.14
Cspg4Q8VHY0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cspg4Q8VHY0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cspg4Q8VHY0 Gm43514-201ENSMUST00000198852 424 ntBASIC15.91■□□□□ 0.14
Cspg4Q8VHY0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cspg4Q8VHY0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cspg4Q8VHY0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Cspg4Q8VHY0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cspg4Q8VHY0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.9■□□□□ 0.14
Cspg4Q8VHY0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Cspg4Q8VHY0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cspg4Q8VHY0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cspg4Q8VHY0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cspg4Q8VHY0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cspg4Q8VHY0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cspg4Q8VHY0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cspg4Q8VHY0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cspg4Q8VHY0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cspg4Q8VHY0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Cspg4Q8VHY0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cspg4Q8VHY0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Cspg4Q8VHY0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cspg4Q8VHY0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cspg4Q8VHY0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Cspg4Q8VHY0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cspg4Q8VHY0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cspg4Q8VHY0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.89■□□□□ 0.13
Cspg4Q8VHY0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cspg4Q8VHY0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cspg4Q8VHY0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cspg4Q8VHY0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cspg4Q8VHY0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cspg4Q8VHY0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cspg4Q8VHY0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cspg4Q8VHY0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cspg4Q8VHY0 Gm11927-201ENSMUST00000118472 759 ntBASIC15.89■□□□□ 0.13
Cspg4Q8VHY0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cspg4Q8VHY0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cspg4Q8VHY0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cspg4Q8VHY0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.89■□□□□ 0.13
Cspg4Q8VHY0 Gm20634-201ENSMUST00000090779 2956 ntBASIC15.89■□□□□ 0.13
Cspg4Q8VHY0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cspg4Q8VHY0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cspg4Q8VHY0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cspg4Q8VHY0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.88■□□□□ 0.13
Cspg4Q8VHY0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cspg4Q8VHY0 Gm18032-201ENSMUST00000222541 538 ntBASIC15.88■□□□□ 0.13
Cspg4Q8VHY0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cspg4Q8VHY0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cspg4Q8VHY0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cspg4Q8VHY0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cspg4Q8VHY0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Cspg4Q8VHY0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Cspg4Q8VHY0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.88■□□□□ 0.13
Cspg4Q8VHY0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Cspg4Q8VHY0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.88■□□□□ 0.13
Cspg4Q8VHY0 Gm43183-201ENSMUST00000200632 547 ntBASIC15.88■□□□□ 0.13
Cspg4Q8VHY0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.88■□□□□ 0.13
Cspg4Q8VHY0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cspg4Q8VHY0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cspg4Q8VHY0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cspg4Q8VHY0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cspg4Q8VHY0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cspg4Q8VHY0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.87■□□□□ 0.13
Cspg4Q8VHY0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cspg4Q8VHY0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cspg4Q8VHY0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cspg4Q8VHY0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cspg4Q8VHY0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.86■□□□□ 0.13
Cspg4Q8VHY0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cspg4Q8VHY0 Gm28033-201ENSMUST00000184224 96 ntBASIC15.86■□□□□ 0.13
Cspg4Q8VHY0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.86■□□□□ 0.13
Cspg4Q8VHY0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cspg4Q8VHY0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cspg4Q8VHY0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cspg4Q8VHY0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cspg4Q8VHY0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.86■□□□□ 0.13
Cspg4Q8VHY0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cspg4Q8VHY0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cspg4Q8VHY0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cspg4Q8VHY0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cspg4Q8VHY0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cspg4Q8VHY0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cspg4Q8VHY0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cspg4Q8VHY0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cspg4Q8VHY0 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms