Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Rpa1Q8VEE4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpa1Q8VEE4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rpa1Q8VEE4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpa1Q8VEE4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpa1Q8VEE4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpa1Q8VEE4 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.56■□□□□ 0.56
Rpa1Q8VEE4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpa1Q8VEE4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpa1Q8VEE4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpa1Q8VEE4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpa1Q8VEE4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.55■□□□□ 0.56
Rpa1Q8VEE4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpa1Q8VEE4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rpa1Q8VEE4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpa1Q8VEE4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.55■□□□□ 0.56
Rpa1Q8VEE4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpa1Q8VEE4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpa1Q8VEE4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rpa1Q8VEE4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rpa1Q8VEE4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpa1Q8VEE4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpa1Q8VEE4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rpa1Q8VEE4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rpa1Q8VEE4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpa1Q8VEE4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpa1Q8VEE4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rpa1Q8VEE4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rpa1Q8VEE4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.54■□□□□ 0.56
Rpa1Q8VEE4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.54■□□□□ 0.56
Rpa1Q8VEE4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.54■□□□□ 0.56
Rpa1Q8VEE4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rpa1Q8VEE4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Rpa1Q8VEE4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Rpa1Q8VEE4 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.54■□□□□ 0.56
Rpa1Q8VEE4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
Rpa1Q8VEE4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpa1Q8VEE4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpa1Q8VEE4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpa1Q8VEE4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpa1Q8VEE4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpa1Q8VEE4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.53■□□□□ 0.56
Rpa1Q8VEE4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpa1Q8VEE4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
Rpa1Q8VEE4 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpa1Q8VEE4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpa1Q8VEE4 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Rpa1Q8VEE4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpa1Q8VEE4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpa1Q8VEE4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rpa1Q8VEE4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.52■□□□□ 0.56
Rpa1Q8VEE4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpa1Q8VEE4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpa1Q8VEE4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpa1Q8VEE4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rpa1Q8VEE4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rpa1Q8VEE4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rpa1Q8VEE4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rpa1Q8VEE4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rpa1Q8VEE4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Rpa1Q8VEE4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rpa1Q8VEE4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rpa1Q8VEE4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpa1Q8VEE4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpa1Q8VEE4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpa1Q8VEE4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rpa1Q8VEE4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rpa1Q8VEE4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpa1Q8VEE4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rpa1Q8VEE4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpa1Q8VEE4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.51■□□□□ 0.55
Rpa1Q8VEE4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpa1Q8VEE4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rpa1Q8VEE4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rpa1Q8VEE4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rpa1Q8VEE4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rpa1Q8VEE4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rpa1Q8VEE4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpa1Q8VEE4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpa1Q8VEE4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rpa1Q8VEE4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpa1Q8VEE4 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.5■□□□□ 0.55
Rpa1Q8VEE4 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rpa1Q8VEE4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpa1Q8VEE4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpa1Q8VEE4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpa1Q8VEE4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.5■□□□□ 0.55
Rpa1Q8VEE4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.5■□□□□ 0.55
Rpa1Q8VEE4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpa1Q8VEE4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpa1Q8VEE4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.5■□□□□ 0.55
Rpa1Q8VEE4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rpa1Q8VEE4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpa1Q8VEE4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.49■□□□□ 0.55
Rpa1Q8VEE4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rpa1Q8VEE4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpa1Q8VEE4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpa1Q8VEE4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rpa1Q8VEE4 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.49■□□□□ 0.55
Rpa1Q8VEE4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms