Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3kbp1Q8R550 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Sh3kbp1Q8R550 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Sh3kbp1Q8R550 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3kbp1Q8R550 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Sh3kbp1Q8R550 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3kbp1Q8R550 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.98■□□□□ 0.63
Sh3kbp1Q8R550 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3kbp1Q8R550 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3kbp1Q8R550 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3kbp1Q8R550 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Sh3kbp1Q8R550 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.98■□□□□ 0.63
Sh3kbp1Q8R550 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.98■□□□□ 0.63
Sh3kbp1Q8R550 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3kbp1Q8R550 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3kbp1Q8R550 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.98■□□□□ 0.63
Sh3kbp1Q8R550 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3kbp1Q8R550 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Sh3kbp1Q8R550 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3kbp1Q8R550 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3kbp1Q8R550 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Sh3kbp1Q8R550 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3kbp1Q8R550 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3kbp1Q8R550 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3kbp1Q8R550 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Sh3kbp1Q8R550 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.98■□□□□ 0.63
Sh3kbp1Q8R550 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3kbp1Q8R550 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Sh3kbp1Q8R550 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3kbp1Q8R550 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3kbp1Q8R550 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.97■□□□□ 0.63
Sh3kbp1Q8R550 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3kbp1Q8R550 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.97■□□□□ 0.63
Sh3kbp1Q8R550 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.97■□□□□ 0.63
Sh3kbp1Q8R550 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3kbp1Q8R550 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3kbp1Q8R550 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3kbp1Q8R550 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3kbp1Q8R550 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.97■□□□□ 0.63
Sh3kbp1Q8R550 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3kbp1Q8R550 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3kbp1Q8R550 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sh3kbp1Q8R550 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Sh3kbp1Q8R550 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Sh3kbp1Q8R550 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sh3kbp1Q8R550 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sh3kbp1Q8R550 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sh3kbp1Q8R550 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sh3kbp1Q8R550 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sh3kbp1Q8R550 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sh3kbp1Q8R550 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sh3kbp1Q8R550 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3kbp1Q8R550 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3kbp1Q8R550 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3kbp1Q8R550 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Sh3kbp1Q8R550 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Sh3kbp1Q8R550 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.95■□□□□ 0.62
Sh3kbp1Q8R550 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.95■□□□□ 0.62
Sh3kbp1Q8R550 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3kbp1Q8R550 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3kbp1Q8R550 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3kbp1Q8R550 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Sh3kbp1Q8R550 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3kbp1Q8R550 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3kbp1Q8R550 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3kbp1Q8R550 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3kbp1Q8R550 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Sh3kbp1Q8R550 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3kbp1Q8R550 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.94■□□□□ 0.62
Sh3kbp1Q8R550 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3kbp1Q8R550 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3kbp1Q8R550 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.94■□□□□ 0.62
Sh3kbp1Q8R550 Gm8520-201ENSMUST00000186517 868 ntBASIC18.94■□□□□ 0.62
Sh3kbp1Q8R550 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.94■□□□□ 0.62
Sh3kbp1Q8R550 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3kbp1Q8R550 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3kbp1Q8R550 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3kbp1Q8R550 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3kbp1Q8R550 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Sh3kbp1Q8R550 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3kbp1Q8R550 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Sh3kbp1Q8R550 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3kbp1Q8R550 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3kbp1Q8R550 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sh3kbp1Q8R550 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3kbp1Q8R550 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.93■□□□□ 0.62
Sh3kbp1Q8R550 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sh3kbp1Q8R550 Gm37856-201ENSMUST00000191634 999 ntBASIC18.93■□□□□ 0.62
Sh3kbp1Q8R550 Gm26524-201ENSMUST00000192339 390 ntBASIC18.93■□□□□ 0.62
Sh3kbp1Q8R550 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3kbp1Q8R550 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.93■□□□□ 0.62
Sh3kbp1Q8R550 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3kbp1Q8R550 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3kbp1Q8R550 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.93■□□□□ 0.62
Sh3kbp1Q8R550 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Sh3kbp1Q8R550 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3kbp1Q8R550 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sh3kbp1Q8R550 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3kbp1Q8R550 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Sh3kbp1Q8R550 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms