Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdt1Q8R4E9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdt1Q8R4E9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdt1Q8R4E9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdt1Q8R4E9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cdt1Q8R4E9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdt1Q8R4E9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdt1Q8R4E9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdt1Q8R4E9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cdt1Q8R4E9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdt1Q8R4E9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.83■□□□□ 0.44
Cdt1Q8R4E9 Mir6982-201ENSMUST00000184354 68 ntBASIC17.83■□□□□ 0.44
Cdt1Q8R4E9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Cdt1Q8R4E9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdt1Q8R4E9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdt1Q8R4E9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdt1Q8R4E9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdt1Q8R4E9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdt1Q8R4E9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cdt1Q8R4E9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdt1Q8R4E9 Gm13534-201ENSMUST00000121169 513 ntBASIC17.82■□□□□ 0.44
Cdt1Q8R4E9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.82■□□□□ 0.44
Cdt1Q8R4E9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cdt1Q8R4E9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdt1Q8R4E9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.82■□□□□ 0.44
Cdt1Q8R4E9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdt1Q8R4E9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cdt1Q8R4E9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdt1Q8R4E9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdt1Q8R4E9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdt1Q8R4E9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cdt1Q8R4E9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdt1Q8R4E9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdt1Q8R4E9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdt1Q8R4E9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdt1Q8R4E9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdt1Q8R4E9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdt1Q8R4E9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cdt1Q8R4E9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cdt1Q8R4E9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cdt1Q8R4E9 Gm6420-201ENSMUST00000193885 723 ntBASIC17.81■□□□□ 0.44
Cdt1Q8R4E9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdt1Q8R4E9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Cdt1Q8R4E9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdt1Q8R4E9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdt1Q8R4E9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdt1Q8R4E9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cdt1Q8R4E9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdt1Q8R4E9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cdt1Q8R4E9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdt1Q8R4E9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdt1Q8R4E9 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.8■□□□□ 0.44
Cdt1Q8R4E9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cdt1Q8R4E9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdt1Q8R4E9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdt1Q8R4E9 Gm37856-201ENSMUST00000191634 999 ntBASIC17.8■□□□□ 0.44
Cdt1Q8R4E9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cdt1Q8R4E9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdt1Q8R4E9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdt1Q8R4E9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdt1Q8R4E9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdt1Q8R4E9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdt1Q8R4E9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdt1Q8R4E9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdt1Q8R4E9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdt1Q8R4E9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdt1Q8R4E9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdt1Q8R4E9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdt1Q8R4E9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdt1Q8R4E9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.79■□□□□ 0.44
Cdt1Q8R4E9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.79■□□□□ 0.44
Cdt1Q8R4E9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.79■□□□□ 0.44
Cdt1Q8R4E9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdt1Q8R4E9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdt1Q8R4E9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdt1Q8R4E9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdt1Q8R4E9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdt1Q8R4E9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdt1Q8R4E9 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.79■□□□□ 0.44
Cdt1Q8R4E9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdt1Q8R4E9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cdt1Q8R4E9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
Cdt1Q8R4E9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdt1Q8R4E9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdt1Q8R4E9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cdt1Q8R4E9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdt1Q8R4E9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdt1Q8R4E9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.78■□□□□ 0.44
Cdt1Q8R4E9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cdt1Q8R4E9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdt1Q8R4E9 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.78■□□□□ 0.44
Cdt1Q8R4E9 Gm7977-201ENSMUST00000193787 748 ntBASIC17.78■□□□□ 0.44
Cdt1Q8R4E9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.78■□□□□ 0.44
Cdt1Q8R4E9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.78■□□□□ 0.44
Cdt1Q8R4E9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdt1Q8R4E9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdt1Q8R4E9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cdt1Q8R4E9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdt1Q8R4E9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdt1Q8R4E9 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms