Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Atf7Q8R0S1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Atf7Q8R0S1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Atf7Q8R0S1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Atf7Q8R0S1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atf7Q8R0S1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.8■■□□□ 1.08
Atf7Q8R0S1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.8■■□□□ 1.08
Atf7Q8R0S1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atf7Q8R0S1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Atf7Q8R0S1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.8■■□□□ 1.08
Atf7Q8R0S1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atf7Q8R0S1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atf7Q8R0S1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atf7Q8R0S1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
Atf7Q8R0S1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Atf7Q8R0S1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atf7Q8R0S1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atf7Q8R0S1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Atf7Q8R0S1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atf7Q8R0S1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Atf7Q8R0S1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atf7Q8R0S1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atf7Q8R0S1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atf7Q8R0S1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atf7Q8R0S1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
Atf7Q8R0S1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.78■■□□□ 1.08
Atf7Q8R0S1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atf7Q8R0S1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Atf7Q8R0S1 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.78■■□□□ 1.08
Atf7Q8R0S1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Atf7Q8R0S1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atf7Q8R0S1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atf7Q8R0S1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atf7Q8R0S1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Atf7Q8R0S1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.77■■□□□ 1.08
Atf7Q8R0S1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Atf7Q8R0S1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.77■■□□□ 1.08
Atf7Q8R0S1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atf7Q8R0S1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Atf7Q8R0S1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atf7Q8R0S1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atf7Q8R0S1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Atf7Q8R0S1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atf7Q8R0S1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.76■■□□□ 1.07
Atf7Q8R0S1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Atf7Q8R0S1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
Atf7Q8R0S1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.76■■□□□ 1.07
Atf7Q8R0S1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.76■■□□□ 1.07
Atf7Q8R0S1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atf7Q8R0S1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atf7Q8R0S1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atf7Q8R0S1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atf7Q8R0S1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atf7Q8R0S1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atf7Q8R0S1 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.75■■□□□ 1.07
Atf7Q8R0S1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atf7Q8R0S1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atf7Q8R0S1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atf7Q8R0S1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atf7Q8R0S1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.75■■□□□ 1.07
Atf7Q8R0S1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atf7Q8R0S1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atf7Q8R0S1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atf7Q8R0S1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.75■■□□□ 1.07
Atf7Q8R0S1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atf7Q8R0S1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atf7Q8R0S1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atf7Q8R0S1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Atf7Q8R0S1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atf7Q8R0S1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atf7Q8R0S1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Atf7Q8R0S1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Atf7Q8R0S1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atf7Q8R0S1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.74■■□□□ 1.07
Atf7Q8R0S1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atf7Q8R0S1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atf7Q8R0S1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atf7Q8R0S1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atf7Q8R0S1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atf7Q8R0S1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Atf7Q8R0S1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Atf7Q8R0S1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Atf7Q8R0S1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atf7Q8R0S1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Atf7Q8R0S1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
Atf7Q8R0S1 Gm42569-201ENSMUST00000200539 472 ntBASIC21.73■■□□□ 1.07
Atf7Q8R0S1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atf7Q8R0S1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atf7Q8R0S1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Atf7Q8R0S1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atf7Q8R0S1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.73■■□□□ 1.07
Atf7Q8R0S1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atf7Q8R0S1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atf7Q8R0S1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atf7Q8R0S1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atf7Q8R0S1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Atf7Q8R0S1 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.72■■□□□ 1.07
Atf7Q8R0S1 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.72■■□□□ 1.07
Atf7Q8R0S1 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.72■■□□□ 1.07
Atf7Q8R0S1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms