Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ShfQ8CG80 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ShfQ8CG80 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ShfQ8CG80 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ShfQ8CG80 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ShfQ8CG80 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ShfQ8CG80 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ShfQ8CG80 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ShfQ8CG80 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ShfQ8CG80 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.48■□□□□ 0.23
ShfQ8CG80 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
ShfQ8CG80 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ShfQ8CG80 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.48■□□□□ 0.23
ShfQ8CG80 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ShfQ8CG80 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ShfQ8CG80 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
ShfQ8CG80 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ShfQ8CG80 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ShfQ8CG80 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ShfQ8CG80 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ShfQ8CG80 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ShfQ8CG80 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ShfQ8CG80 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ShfQ8CG80 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ShfQ8CG80 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ShfQ8CG80 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ShfQ8CG80 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ShfQ8CG80 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ShfQ8CG80 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ShfQ8CG80 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
ShfQ8CG80 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ShfQ8CG80 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
ShfQ8CG80 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.47■□□□□ 0.23
ShfQ8CG80 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.47■□□□□ 0.23
ShfQ8CG80 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.47■□□□□ 0.23
ShfQ8CG80 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ShfQ8CG80 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
ShfQ8CG80 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ShfQ8CG80 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.47■□□□□ 0.23
ShfQ8CG80 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
ShfQ8CG80 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ShfQ8CG80 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ShfQ8CG80 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ShfQ8CG80 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ShfQ8CG80 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.47■□□□□ 0.23
ShfQ8CG80 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.46■□□□□ 0.23
ShfQ8CG80 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
ShfQ8CG80 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ShfQ8CG80 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.46■□□□□ 0.23
ShfQ8CG80 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ShfQ8CG80 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ShfQ8CG80 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.46■□□□□ 0.23
ShfQ8CG80 Gm43017-201ENSMUST00000198296 752 ntBASIC16.46■□□□□ 0.23
ShfQ8CG80 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.46■□□□□ 0.23
ShfQ8CG80 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.46■□□□□ 0.23
ShfQ8CG80 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
ShfQ8CG80 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ShfQ8CG80 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.46■□□□□ 0.23
ShfQ8CG80 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ShfQ8CG80 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ShfQ8CG80 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ShfQ8CG80 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ShfQ8CG80 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ShfQ8CG80 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ShfQ8CG80 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.45■□□□□ 0.22
ShfQ8CG80 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ShfQ8CG80 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.45■□□□□ 0.22
ShfQ8CG80 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ShfQ8CG80 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.45■□□□□ 0.22
ShfQ8CG80 Gm45417-201ENSMUST00000209533 758 ntBASIC16.45■□□□□ 0.22
ShfQ8CG80 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ShfQ8CG80 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.45■□□□□ 0.22
ShfQ8CG80 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.45■□□□□ 0.22
ShfQ8CG80 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ShfQ8CG80 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ShfQ8CG80 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ShfQ8CG80 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ShfQ8CG80 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ShfQ8CG80 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ShfQ8CG80 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ShfQ8CG80 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.45■□□□□ 0.22
ShfQ8CG80 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ShfQ8CG80 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.44■□□□□ 0.22
ShfQ8CG80 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ShfQ8CG80 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
ShfQ8CG80 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ShfQ8CG80 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.44■□□□□ 0.22
ShfQ8CG80 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ShfQ8CG80 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
ShfQ8CG80 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.44■□□□□ 0.22
ShfQ8CG80 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ShfQ8CG80 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.44■□□□□ 0.22
ShfQ8CG80 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ShfQ8CG80 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ShfQ8CG80 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ShfQ8CG80 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
ShfQ8CG80 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ShfQ8CG80 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ShfQ8CG80 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ShfQ8CG80 Gm43060-201ENSMUST00000200621 289 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms