Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc28bQ8CEG5 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc28bQ8CEG5 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc28bQ8CEG5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ccdc28bQ8CEG5 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc28bQ8CEG5 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc28bQ8CEG5 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.22■□□□□ 0.51
Ccdc28bQ8CEG5 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc28bQ8CEG5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.21■□□□□ 0.51
Ccdc28bQ8CEG5 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc28bQ8CEG5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc28bQ8CEG5 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc28bQ8CEG5 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc28bQ8CEG5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.21■□□□□ 0.51
Ccdc28bQ8CEG5 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.21■□□□□ 0.51
Ccdc28bQ8CEG5 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ccdc28bQ8CEG5 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc28bQ8CEG5 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc28bQ8CEG5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc28bQ8CEG5 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc28bQ8CEG5 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc28bQ8CEG5 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc28bQ8CEG5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Ccdc28bQ8CEG5 Golgb1-201ENSMUST00000023534 498 ntBASIC18.2■□□□□ 0.5
Ccdc28bQ8CEG5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc28bQ8CEG5 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc28bQ8CEG5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc28bQ8CEG5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc28bQ8CEG5 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.19■□□□□ 0.5
Ccdc28bQ8CEG5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Ccdc28bQ8CEG5 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.19■□□□□ 0.5
Ccdc28bQ8CEG5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.19■□□□□ 0.5
Ccdc28bQ8CEG5 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc28bQ8CEG5 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc28bQ8CEG5 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc28bQ8CEG5 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc28bQ8CEG5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc28bQ8CEG5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc28bQ8CEG5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc28bQ8CEG5 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Ccdc28bQ8CEG5 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ccdc28bQ8CEG5 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc28bQ8CEG5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc28bQ8CEG5 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc28bQ8CEG5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc28bQ8CEG5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.18■□□□□ 0.5
Ccdc28bQ8CEG5 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc28bQ8CEG5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc28bQ8CEG5 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc28bQ8CEG5 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc28bQ8CEG5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc28bQ8CEG5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc28bQ8CEG5 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc28bQ8CEG5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Ccdc28bQ8CEG5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc28bQ8CEG5 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc28bQ8CEG5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ccdc28bQ8CEG5 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.17■□□□□ 0.5
Ccdc28bQ8CEG5 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.17■□□□□ 0.5
Ccdc28bQ8CEG5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc28bQ8CEG5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc28bQ8CEG5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ccdc28bQ8CEG5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc28bQ8CEG5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc28bQ8CEG5 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc28bQ8CEG5 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.17■□□□□ 0.5
Ccdc28bQ8CEG5 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc28bQ8CEG5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc28bQ8CEG5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc28bQ8CEG5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
Ccdc28bQ8CEG5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.16■□□□□ 0.5
Ccdc28bQ8CEG5 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.16■□□□□ 0.5
Ccdc28bQ8CEG5 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.16■□□□□ 0.5
Ccdc28bQ8CEG5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc28bQ8CEG5 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc28bQ8CEG5 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc28bQ8CEG5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.16■□□□□ 0.5
Ccdc28bQ8CEG5 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc28bQ8CEG5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.16■□□□□ 0.5
Ccdc28bQ8CEG5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc28bQ8CEG5 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc28bQ8CEG5 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc28bQ8CEG5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.16■□□□□ 0.5
Ccdc28bQ8CEG5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc28bQ8CEG5 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc28bQ8CEG5 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc28bQ8CEG5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
Ccdc28bQ8CEG5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ccdc28bQ8CEG5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Ccdc28bQ8CEG5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc28bQ8CEG5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ccdc28bQ8CEG5 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Ccdc28bQ8CEG5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc28bQ8CEG5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc28bQ8CEG5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc28bQ8CEG5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc28bQ8CEG5 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc28bQ8CEG5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc28bQ8CEG5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.15■□□□□ 0.5
Ccdc28bQ8CEG5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms