Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb7Q8CDY9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Pcdhb7Q8CDY9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb7Q8CDY9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb7Q8CDY9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb7Q8CDY9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb7Q8CDY9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.51■□□□□ 0.55
Pcdhb7Q8CDY9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb7Q8CDY9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.51■□□□□ 0.55
Pcdhb7Q8CDY9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb7Q8CDY9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb7Q8CDY9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Pcdhb7Q8CDY9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhb7Q8CDY9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb7Q8CDY9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb7Q8CDY9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb7Q8CDY9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb7Q8CDY9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb7Q8CDY9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb7Q8CDY9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb7Q8CDY9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb7Q8CDY9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhb7Q8CDY9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb7Q8CDY9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb7Q8CDY9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcdhb7Q8CDY9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb7Q8CDY9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb7Q8CDY9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.5■□□□□ 0.55
Pcdhb7Q8CDY9 Gm42778-201ENSMUST00000199644 553 ntBASIC18.5■□□□□ 0.55
Pcdhb7Q8CDY9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.5■□□□□ 0.55
Pcdhb7Q8CDY9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb7Q8CDY9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhb7Q8CDY9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb7Q8CDY9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb7Q8CDY9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb7Q8CDY9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb7Q8CDY9 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.49■□□□□ 0.55
Pcdhb7Q8CDY9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb7Q8CDY9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb7Q8CDY9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb7Q8CDY9 Reep4-203ENSMUST00000226563 1444 ntBASIC18.49■□□□□ 0.55
Pcdhb7Q8CDY9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb7Q8CDY9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb7Q8CDY9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb7Q8CDY9 Gm44487-201ENSMUST00000205145 325 ntBASIC18.49■□□□□ 0.55
Pcdhb7Q8CDY9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.49■□□□□ 0.55
Pcdhb7Q8CDY9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb7Q8CDY9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb7Q8CDY9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb7Q8CDY9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb7Q8CDY9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb7Q8CDY9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb7Q8CDY9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb7Q8CDY9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb7Q8CDY9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb7Q8CDY9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb7Q8CDY9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb7Q8CDY9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb7Q8CDY9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb7Q8CDY9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb7Q8CDY9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb7Q8CDY9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb7Q8CDY9 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.48■□□□□ 0.55
Pcdhb7Q8CDY9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Pcdhb7Q8CDY9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.48■□□□□ 0.55
Pcdhb7Q8CDY9 Gm10493-201ENSMUST00000097270 612 ntBASIC18.48■□□□□ 0.55
Pcdhb7Q8CDY9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb7Q8CDY9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb7Q8CDY9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhb7Q8CDY9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb7Q8CDY9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb7Q8CDY9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb7Q8CDY9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.47■□□□□ 0.55
Pcdhb7Q8CDY9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.47■□□□□ 0.55
Pcdhb7Q8CDY9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdhb7Q8CDY9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb7Q8CDY9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb7Q8CDY9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhb7Q8CDY9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Pcdhb7Q8CDY9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdhb7Q8CDY9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb7Q8CDY9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb7Q8CDY9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb7Q8CDY9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb7Q8CDY9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb7Q8CDY9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.47■□□□□ 0.55
Pcdhb7Q8CDY9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhb7Q8CDY9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb7Q8CDY9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Pcdhb7Q8CDY9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb7Q8CDY9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.46■□□□□ 0.55
Pcdhb7Q8CDY9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhb7Q8CDY9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhb7Q8CDY9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb7Q8CDY9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb7Q8CDY9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhb7Q8CDY9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb7Q8CDY9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb7Q8CDY9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb7Q8CDY9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms