Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc38Q8CDN8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc38Q8CDN8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc38Q8CDN8 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.5■□□□□ 0.87
Ccdc38Q8CDN8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc38Q8CDN8 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.5■□□□□ 0.87
Ccdc38Q8CDN8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc38Q8CDN8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.5■□□□□ 0.87
Ccdc38Q8CDN8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ccdc38Q8CDN8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ccdc38Q8CDN8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc38Q8CDN8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc38Q8CDN8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc38Q8CDN8 Gm13234-201ENSMUST00000120010 747 ntBASIC20.49■□□□□ 0.87
Ccdc38Q8CDN8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ccdc38Q8CDN8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc38Q8CDN8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc38Q8CDN8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc38Q8CDN8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc38Q8CDN8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Ccdc38Q8CDN8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc38Q8CDN8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc38Q8CDN8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc38Q8CDN8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc38Q8CDN8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.48■□□□□ 0.87
Ccdc38Q8CDN8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc38Q8CDN8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc38Q8CDN8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc38Q8CDN8 Rarb-207ENSMUST00000225921 2756 ntBASIC20.48■□□□□ 0.87
Ccdc38Q8CDN8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.48■□□□□ 0.87
Ccdc38Q8CDN8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc38Q8CDN8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.48■□□□□ 0.87
Ccdc38Q8CDN8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc38Q8CDN8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc38Q8CDN8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Ccdc38Q8CDN8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc38Q8CDN8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc38Q8CDN8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc38Q8CDN8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc38Q8CDN8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc38Q8CDN8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.47■□□□□ 0.87
Ccdc38Q8CDN8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc38Q8CDN8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ccdc38Q8CDN8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc38Q8CDN8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.47■□□□□ 0.87
Ccdc38Q8CDN8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ccdc38Q8CDN8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc38Q8CDN8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc38Q8CDN8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc38Q8CDN8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ccdc38Q8CDN8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc38Q8CDN8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc38Q8CDN8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Ccdc38Q8CDN8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc38Q8CDN8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc38Q8CDN8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc38Q8CDN8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.46■□□□□ 0.87
Ccdc38Q8CDN8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.45■□□□□ 0.86
Ccdc38Q8CDN8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Ccdc38Q8CDN8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.45■□□□□ 0.86
Ccdc38Q8CDN8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc38Q8CDN8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc38Q8CDN8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.45■□□□□ 0.86
Ccdc38Q8CDN8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc38Q8CDN8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc38Q8CDN8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Ccdc38Q8CDN8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc38Q8CDN8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Ccdc38Q8CDN8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc38Q8CDN8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc38Q8CDN8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.45■□□□□ 0.86
Ccdc38Q8CDN8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc38Q8CDN8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc38Q8CDN8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc38Q8CDN8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc38Q8CDN8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc38Q8CDN8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc38Q8CDN8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc38Q8CDN8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc38Q8CDN8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc38Q8CDN8 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.44■□□□□ 0.86
Ccdc38Q8CDN8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc38Q8CDN8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc38Q8CDN8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Ccdc38Q8CDN8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc38Q8CDN8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc38Q8CDN8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Ccdc38Q8CDN8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc38Q8CDN8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc38Q8CDN8 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.44■□□□□ 0.86
Ccdc38Q8CDN8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc38Q8CDN8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Ccdc38Q8CDN8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc38Q8CDN8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.43■□□□□ 0.86
Ccdc38Q8CDN8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ccdc38Q8CDN8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.43■□□□□ 0.86
Ccdc38Q8CDN8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.43■□□□□ 0.86
Ccdc38Q8CDN8 Grk6-206ENSMUST00000224995 2971 ntBASIC20.43■□□□□ 0.86
Ccdc38Q8CDN8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc38Q8CDN8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms