Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf31Q8CCF0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Prpf31Q8CCF0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.19■□□□□ 0.82
Prpf31Q8CCF0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf31Q8CCF0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.19■□□□□ 0.82
Prpf31Q8CCF0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf31Q8CCF0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf31Q8CCF0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf31Q8CCF0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf31Q8CCF0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf31Q8CCF0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf31Q8CCF0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf31Q8CCF0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Prpf31Q8CCF0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Prpf31Q8CCF0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf31Q8CCF0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf31Q8CCF0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf31Q8CCF0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf31Q8CCF0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf31Q8CCF0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.17■□□□□ 0.82
Prpf31Q8CCF0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf31Q8CCF0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Prpf31Q8CCF0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Prpf31Q8CCF0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf31Q8CCF0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Prpf31Q8CCF0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
Prpf31Q8CCF0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf31Q8CCF0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf31Q8CCF0 Trmt13-210ENSMUST00000198454 880 ntBASIC20.17■□□□□ 0.82
Prpf31Q8CCF0 Gm2559-201ENSMUST00000201323 363 ntBASIC20.17■□□□□ 0.82
Prpf31Q8CCF0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Prpf31Q8CCF0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf31Q8CCF0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Prpf31Q8CCF0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf31Q8CCF0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf31Q8CCF0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf31Q8CCF0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf31Q8CCF0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf31Q8CCF0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.16■□□□□ 0.82
Prpf31Q8CCF0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf31Q8CCF0 Gm27275-201ENSMUST00000184318 272 ntBASIC20.16■□□□□ 0.82
Prpf31Q8CCF0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Prpf31Q8CCF0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf31Q8CCF0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf31Q8CCF0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf31Q8CCF0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Prpf31Q8CCF0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf31Q8CCF0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf31Q8CCF0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf31Q8CCF0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf31Q8CCF0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf31Q8CCF0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf31Q8CCF0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Prpf31Q8CCF0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Prpf31Q8CCF0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Prpf31Q8CCF0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf31Q8CCF0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf31Q8CCF0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf31Q8CCF0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf31Q8CCF0 Dio3-201ENSMUST00000097228 1449 ntBASIC20.14■□□□□ 0.81
Prpf31Q8CCF0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf31Q8CCF0 Gm8520-201ENSMUST00000186517 868 ntBASIC20.14■□□□□ 0.81
Prpf31Q8CCF0 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.14■□□□□ 0.81
Prpf31Q8CCF0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf31Q8CCF0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf31Q8CCF0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf31Q8CCF0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf31Q8CCF0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf31Q8CCF0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.13■□□□□ 0.81
Prpf31Q8CCF0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf31Q8CCF0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.13■□□□□ 0.81
Prpf31Q8CCF0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.13■□□□□ 0.81
Prpf31Q8CCF0 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.13■□□□□ 0.81
Prpf31Q8CCF0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf31Q8CCF0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf31Q8CCF0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf31Q8CCF0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf31Q8CCF0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.13■□□□□ 0.81
Prpf31Q8CCF0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf31Q8CCF0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Prpf31Q8CCF0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf31Q8CCF0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf31Q8CCF0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Prpf31Q8CCF0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf31Q8CCF0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf31Q8CCF0 Gm22240-201ENSMUST00000175225 82 ntBASIC20.12■□□□□ 0.81
Prpf31Q8CCF0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Prpf31Q8CCF0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf31Q8CCF0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf31Q8CCF0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.11■□□□□ 0.81
Prpf31Q8CCF0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf31Q8CCF0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Prpf31Q8CCF0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf31Q8CCF0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf31Q8CCF0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf31Q8CCF0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf31Q8CCF0 Gm13168-201ENSMUST00000121771 632 ntBASIC20.11■□□□□ 0.81
Prpf31Q8CCF0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.11■□□□□ 0.81
Prpf31Q8CCF0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf31Q8CCF0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms