Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3rf3Q8C120 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3rf3Q8C120 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sh3rf3Q8C120 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sh3rf3Q8C120 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3rf3Q8C120 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Sh3rf3Q8C120 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3rf3Q8C120 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3rf3Q8C120 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3rf3Q8C120 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3rf3Q8C120 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3rf3Q8C120 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3rf3Q8C120 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3rf3Q8C120 Gm10849-201ENSMUST00000100397 618 ntBASIC19.24■□□□□ 0.67
Sh3rf3Q8C120 Gm7514-201ENSMUST00000209475 934 ntBASIC19.24■□□□□ 0.67
Sh3rf3Q8C120 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3rf3Q8C120 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3rf3Q8C120 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.24■□□□□ 0.67
Sh3rf3Q8C120 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3rf3Q8C120 Gm8495-201ENSMUST00000188740 694 ntBASIC19.23■□□□□ 0.67
Sh3rf3Q8C120 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.23■□□□□ 0.67
Sh3rf3Q8C120 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.23■□□□□ 0.67
Sh3rf3Q8C120 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Sh3rf3Q8C120 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3rf3Q8C120 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3rf3Q8C120 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3rf3Q8C120 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3rf3Q8C120 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3rf3Q8C120 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Sh3rf3Q8C120 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3rf3Q8C120 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.22■□□□□ 0.67
Sh3rf3Q8C120 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3rf3Q8C120 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3rf3Q8C120 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3rf3Q8C120 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3rf3Q8C120 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3rf3Q8C120 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.22■□□□□ 0.67
Sh3rf3Q8C120 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3rf3Q8C120 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3rf3Q8C120 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3rf3Q8C120 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3rf3Q8C120 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.21■□□□□ 0.67
Sh3rf3Q8C120 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3rf3Q8C120 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3rf3Q8C120 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3rf3Q8C120 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Sh3rf3Q8C120 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3rf3Q8C120 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3rf3Q8C120 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3rf3Q8C120 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Sh3rf3Q8C120 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3rf3Q8C120 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.2■□□□□ 0.66
Sh3rf3Q8C120 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3rf3Q8C120 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3rf3Q8C120 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3rf3Q8C120 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3rf3Q8C120 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.2■□□□□ 0.66
Sh3rf3Q8C120 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Sh3rf3Q8C120 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3rf3Q8C120 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3rf3Q8C120 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3rf3Q8C120 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3rf3Q8C120 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.2■□□□□ 0.66
Sh3rf3Q8C120 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3rf3Q8C120 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Sh3rf3Q8C120 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3rf3Q8C120 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3rf3Q8C120 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3rf3Q8C120 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3rf3Q8C120 Gm42569-201ENSMUST00000200539 472 ntBASIC19.19■□□□□ 0.66
Sh3rf3Q8C120 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3rf3Q8C120 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3rf3Q8C120 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3rf3Q8C120 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.19■□□□□ 0.66
Sh3rf3Q8C120 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3rf3Q8C120 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3rf3Q8C120 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3rf3Q8C120 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3rf3Q8C120 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3rf3Q8C120 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.18■□□□□ 0.66
Sh3rf3Q8C120 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3rf3Q8C120 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3rf3Q8C120 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.18■□□□□ 0.66
Sh3rf3Q8C120 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.18■□□□□ 0.66
Sh3rf3Q8C120 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3rf3Q8C120 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3rf3Q8C120 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf3Q8C120 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Sh3rf3Q8C120 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf3Q8C120 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf3Q8C120 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf3Q8C120 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf3Q8C120 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Sh3rf3Q8C120 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.17■□□□□ 0.66
Sh3rf3Q8C120 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf3Q8C120 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf3Q8C120 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Sh3rf3Q8C120 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf3Q8C120 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf3Q8C120 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms